Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02274 and BL05134
See
Amino acid alignment /
Visit
BSNT_02274 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02274.1.5803.seq
# -bsequence dna-align/BL05134.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02274-BL05134.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02274-BL05134.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02274
# 2: BL05134
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 110/177 (62.1%)
# Similarity: 110/177 (62.1%)
# Gaps: 36/177 (20.3%)
# Score: 304.5
#
#
#=======================================
BSNT_02274 1 ATGAAGCGTAAAGCTG-AAGTGAATGAAGC----CATTAAAAATAACAAT 45
|||||..|.||||.|| .|| ||||||||| | ||||.||| ||.
BL05134 1 ATGAAAAGAAAAGTTGCCAG-GAATGAAGCGGCTC-TTAACAAT---AAA 45
BSNT_02274 46 ACACCTACCGAGAGCATGGA----CCCCAATTCATATAAGACACAATATC 91
||.|||.|.||.||||||.| |..||||.||| |||.||||||.
BL05134 46 ACGCCTGCTGAAAGCATGCATGATCATCAATACAT----GACCCAATATG 91
BSNT_02274 92 ATGACGACCCCAATTTTAGA----GGGGCAAACCGCAATTCCAAACAGGG 137
|.|.||| ||....||| ||.||.||||||||.||.|||||.||
BL05134 92 ACGCCGA----AAACGGAGACAGGGGAGCCAACCGCAACTCGAAACACGG 137
BSNT_02274 138 CCAGCAGGGAG----GC----ATGTAA 156
..||||||||| || |||.
BL05134 138 GAAGCAGGGAGAATCGCACCAATGA-- 162
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.