Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02440 and BL05150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02440.1.5803.seq
# -bsequence dna-align/BL05150___ykzI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02440-BL05150___ykzI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02440-BL05150___ykzI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02440
# 2: BL05150___ykzI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 139/249 (55.8%)
# Similarity: 139/249 (55.8%)
# Gaps: 63/249 (25.3%)
# Score: 466.0
#
#
#=======================================
BSNT_02440 1 ATGGCAAAATGGGATGCTTTTTTACAAACAAATGATCTCTGGAAGGGGCG 50
BL05150___ykz 0 -------------------------------------------------- 0
BSNT_02440 51 AAAGACAATGAGGCAAGTTGTAAAAGAGGGATTTAAGGAAGAGAAAAACA 100
||||..|.|.|.||||||.|.|||||.||.||.||.|||.|||
BL05150___ykz 1 -------ATGAAACCAATAGTAAAACAAGGATTGAAAGAGGAAAAAGACA 43
BSNT_02440 101 ATCGTGTTGCTGTCTGGAGACTAGAGGTTGATTATGAATTGGCAACCCTA 150
||||.|..|||||.|||||.||.|||||.|||||||||.|.|||||.||.
BL05150___ykz 44 ATCGGGCCGCTGTTTGGAGGCTTGAGGTCGATTATGAACTTGCAACGCTT 93
BSNT_02440 151 TATGAAGCAATGCAGAAAGAAA--ATGAAGAGCAGATTGAACAAAGCAAA 198
|.||||||.||| ||||.||| |||||...||.||.||....|||||.
BL05150___ykz 94 TTTGAAGCTATG--GAAAAAAAGGATGAAACCCAAATCGAGTTGAGCAAG 141
BSNT_02440 199 AACAAACTTGAGCGACTTAGAAAAGAATGGATTCGTCTTA-ACGGGTAA 246
..||||||.||.|||||.||||||||||||| ||...||| |.||.|.|
BL05150___ykz 142 CGCAAACTGGAACGACTCAGAAAAGAATGGA-TCAGATTACATGGTTGA 189
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