Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02442 and BL05151

See Amino acid alignment / Visit BSNT_02442 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_02442___yktC.1.5803.seq
#    -bsequence dna-align/BL05151___suhB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02442___yktC-BL05151___suhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02442___yktC-BL05151___suhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02442___yktC
# 2: BL05151___suhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 818
# Identity:     582/818 (71.1%)
# Similarity:   582/818 (71.1%)
# Gaps:          43/818 ( 5.3%)
# Score: 2002.5
# 
#
#=======================================

BSNT_02442___      1 ATGACAAATTGGACGGAAATTGATGAGATTGCAAAGAAATGGATAAGAGA     50
                     ||||||||.||||.||||||.|||....|.||.||.|..|||.|.|.|||
BL05151___suh      1 ATGACAAACTGGAAGGAAATCGATCGCCTGGCGAAAAGCTGGGTGAAAGA     50

BSNT_02442___     51 AGCAGGCGCGAGAATTAAACAATCCATGCATGAAAGCCTGACAATTGAAA    100
                     |||.||...|||||||||.|||||.|||.|.||||...||||.|||||||
BL05151___suh     51 AGCTGGTCAGAGAATTAAGCAATCAATGAAAGAAAAGATGACGATTGAAA    100

BSNT_02442___    101 CGAAATCAAATCCGAATGATTTAGTCACCAATATTGACAAAGAAACCGAA    150
                     |||||||.|||||.|||||..|.|||||.||.||||||||.|||||.||.
BL05151___suh    101 CGAAATCGAATCCAAATGACCTTGTCACAAACATTGACAAGGAAACAGAG    150

BSNT_02442___    151 AAGTTTTTCATTGATCGAATTCAAGAAACATTTCCGGGACATCGGATACT    200
                     ...|||||||||||...|||||||......|||||||..||||..||.||
BL05151___suh    151 CGTTTTTTCATTGAAAAAATTCAATCGGTTTTTCCGGATCATCATATTCT    200

BSNT_02442___    201 CGGTGAAGAGGGGCAAGGAGACAAAATCCACTCAC-----TTGAGGGAGT    245
                     .||.|||||.||.|||||.|||||     .|||||     |.||.||.||
BL05151___suh    201 TGGCGAAGAAGGCCAAGGGGACAA-----GCTCACATCTTTGGACGGCGT    245

BSNT_02442___    246 CGTATGGATTATTGATCCAATTGATGGGACGATGAATTTTGTGCACCAGC    295
                     |||.|||||.||.|||||.||.|||||.||||||||.|||.|.||.||..
BL05151___suh    246 CGTTTGGATCATCGATCCGATCGATGGTACGATGAACTTTATTCATCAAA    295

BSNT_02442___    296 AAAGAAATTTTGCGATTTCCATTGGGATTTTTGAAAACGGTGAAGGGAAA    345
                     ||.|.||||||||||||||.||.||.||||||||||||||..||||.|||
BL05151___suh    296 AACGCAATTTTGCGATTTCAATCGGCATTTTTGAAAACGGAAAAGGCAAA    345

BSNT_02442___    346 ATCGGTTTAATTTATGATGTGGTGCACGATGAGCTGTATCACGCATTTAG    395
                     |||||.||.||||||||||||...|||||||||||.|||||.||.|||..
BL05151___suh    346 ATCGGCTTGATTTATGATGTGACTCACGATGAGCTTTATCATGCTTTTCA    395

BSNT_02442___    396 CGGCAGAGGGGCTTATATGAATGAAACGAAGCT-GGCTCCTTTA-----A    439
                     .|||..|||.|||||.|||||..|.||.||||| |||      |     |
BL05151___suh    396 AGGCGAAGGTGCTTACATGAACAATACAAAGCTCGGC------AAGATGA    439

BSNT_02442___    440 AAGAA--ACCGTCATTGAAGAAGCGATTCTTGCCATTAATGCAACATGGG    487
                     |||||  .|||  .||||.|||.|||||||.|||||.|||||.||||||.
BL05151___suh    440 AAGAAGTGCCG--CTTGAGGAATCGATTCTGGCCATCAATGCGACATGGA    487

BSNT_02442___    488 TAACGGAAAACAGAAGAATTGATCAAAGTGTGTTAGCGCCACTTGTGAAA    537
                     |.||.||.||||||.|.||.||||.|||.||.|||.|.||.|||||.|..
BL05151___suh    488 TCACCGAGAACAGACGGATCGATCCAAGCGTATTATCCCCGCTTGTCAGG    537

BSNT_02442___    538 AGAGTCAGAGGCACACGCTCATACGGTTCTGCCGCTTTAGAGCTGGCAAA    587
                     .|.||||||||.||.||.|||||||||||.||.|||||.||.||.||..|
BL05151___suh    538 CGCGTCAGAGGGACCCGTTCATACGGTTCAGCGGCTTTGGAACTCGCTTA    587

BSNT_02442___    588 TGTCGCGGCAGGAAGAATAGATGCTTACATCACGATGCGCCTTGCGCCAT    637
                     |||.||||||||.|||||.||||..||..|.||||||.|.||.||.||.|
BL05151___suh    588 TGTAGCGGCAGGCAGAATGGATGTGTATGTGACGATGAGGCTCGCTCCTT    637

BSNT_02442___    638 GGGACTACGCAGCCGGCTGTGTGCTGTTAAATGAAGTAGGAGGCATCTAT    687
                     ||||.|||||.||||||||..|.|||.|..|.||.||.||.||.|..|||
BL05151___suh    638 GGGATTACGCTGCCGGCTGCATTCTGCTTGACGAGGTCGGCGGAACATAT    687

BSNT_02442___    688 ACGACCATTGAAGGAGAGCCGTTTACCTTTTTAGAAAACCACAGTGTGCT    737
                     ||.||||||||.||..|.|||.|.|..|||.|.|||||||||||..|..|
BL05151___suh    688 ACAACCATTGACGGGAAACCGCTCAATTTTCTTGAAAACCACAGCATCGT    737

BSNT_02442___    738 AGCCGGAAACC---CATCTATACATAAAACGATATTTGAAGAGTATCTT-    783
                     ||||||.||.|   ||.||   ||.....||||.||.||.||.||| || 
BL05151___suh    738 AGCCGGCAATCCGGCAGCT---CACCGGGCGATTTTCGACGAATAT-TTG    783

BSNT_02442___    784 ---CATGCTGGGAAGTAG    798
                        ||||      |.|||
BL05151___suh    784 CCGCATG------AATAG    795


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02442 and BL05151

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
