Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02443 and BL05152
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02443___ykzC.1.5803.seq
# -bsequence dna-align/BL05152___ykzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02443___ykzC-BL05152___ykzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02443___ykzC-BL05152___ykzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02443___ykzC
# 2: BL05152___ykzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity: 315/522 (60.3%)
# Similarity: 315/522 (60.3%)
# Gaps: 108/522 (20.7%)
# Score: 897.0
#
#
#=======================================
BSNT_02443___ 1 ATGCTGGGAAGTAGGCCATTTG---AGCAGG-------------ATGATC 34
.|| |||||| .|||||
BL05152___ykz 1 -------------------ATGAATAGCAGGTCTTTCTCTTCTTCTGATC 31
BSNT_02443___ 35 TCAGCTTGTTAGAAAAGCTCGCGGAGGCTCATCCTGTATGGAAAGAGGAG 84
||..|||.||.|||.||||.||.||.||....||.|..|||....||||.
BL05152___ykz 32 TCGCCTTTTTTGAAGAGCTGGCCGAAGCGAGCCCCGGGTGGGTGAAGGAA 81
BSNT_02443___ 85 GAGTTTGGAGATAAAGA---TGCACAAGACTATATCATCTCCTATTCCAT 131
|||.|| ||...|||.| || .||..||||||.|...|.|||.|.||
BL05152___ykz 82 GAGCTT-GACGGAAACAGCCTG--GAACGCTATATGAGTGCTTATGCGAT 128
BSNT_02443___ 132 GTACAACGGGGTATGGCTTGTATGGGAAAAAGACGGTCTGCCTGTTGCCG 181
|||.|||||.|.||||||.||.||||||.|.|..||.|||||.|..||..
BL05152___ykz 129 GTATAACGGTGAATGGCTCGTGTGGGAAGACGGGGGACTGCCGGCGGCTC 178
BSNT_02443___ 182 TCAGCTACCATCTCGAGTGGTCTCCTTCAAACGGTAAGCCGTGGCTCGGA 231
||||||..||||||||.|||.|.|||||.||.||.|||||.|||||||||
BL05152___ykz 179 TCAGCTTTCATCTCGAATGGGCGCCTTCTAATGGCAAGCCTTGGCTCGGA 228
BSNT_02443___ 232 ACG------GTCCTGATTGACCCGGCTGAAGAAAAAAAG---GGACATGC 272
||| |||| || ||||..|...|.||||||| ||.||...
BL05152___ykz 229 ACGCTTCTTGTCC--AT---CCCGATTTCCGCAAAAAAGGCCGGGCAAAA 273
BSNT_02443___ 273 GAAGATGATCATTGAACAGATCAGCAAATTGCTT-AGAGCCAAA-----C 316
|||| |||||| ||..|||| |.|||..|||| |||| ||| |
BL05152___ykz 274 GAAG-TGATCA---AAACGATC-GGAAAACGCTTGAGAG--AAAAGGGGC 316
BSNT_02443___ 317 ACAAAGCGATGTTTGCGGGAGTTCCCATTGAG-----CGCAGTGAATGG- 360
|.||||||.|||||||||.|||.||...|||| | ||||||
BL05152___ykz 317 ATAAAGCGTTGTTTGCGGCAGTGCCTTATGAGAAAGAC-----GAATGGT 361
BSNT_02443___ 361 -----ATACTGTTTTTAAGCCAATGC-GGCTTTGAACAGCTGAAAACGGA 404
||.||| |||..|.| ||.||||||||||||||||||||
BL05152___ykz 362 TGAACATGCTG-------GCCCGTTCAGGATTTGAACAGCTGAAAACGGA 404
BSNT_02443___ 405 AAAAGATGAGAAAGGCAAATC-ATTTATGATCTTGGTGAAG-------CC 446
||||||||| |||||.|||.| ||.|.|||||.||||...| ||
BL05152___ykz 405 AAAAGATGA-AAAGGGAAAACGATATTTGATCATGGTTTTGCCCCTTCCC 453
BSNT_02443___ 447 TTTAGCAGAAGCTGCCGTATGA 468
|| |..||||| .||||
BL05152___ykz 454 TT-----GTGGCTGC--AATGA 468
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