Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02501 and BL05157
See
Amino acid alignment /
Visit
BSNT_02501 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02501___ylbP.1.5803.seq
# -bsequence dna-align/BL05157___ylbP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02501___ylbP-BL05157___ylbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02501___ylbP-BL05157___ylbP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02501___ylbP
# 2: BL05157___ylbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 355/508 (69.9%)
# Similarity: 355/508 (69.9%)
# Gaps: 53/508 (10.4%)
# Score: 1254.0
#
#
#=======================================
BSNT_02501___ 1 -TTGACAAAGGTAGAACGTCTGCTTATCAACTATAAAACGCTGGAAGAAT 49
|.|.|||| ||.||||||.||||.||||||||.||||||||.|||||||
BL05157___ylb 1 ATGGTCAAA-GTCGAACGTTTGCTGATCAACTACAAAACGCTTGAAGAAT 49
BSNT_02501___ 50 TCAAGAAATTCAAAGAATACGGCATTCAGGAGCTTTCAATGCTTGAAGAA 99
|.||.||.||||..||.|||||.|||||.||||||||.|||||.||.||.
BL05157___ylb 50 TTAAAAAGTTCAGGGAGTACGGGATTCAAGAGCTTTCCATGCTGGAGGAC 99
BSNT_02501___ 100 CTTCAGGATAATATTATTGAAAATGACAGCACCTCGCCTTTTTACGGGAT 149
|||.|....||.||.||||||||.|||||||.|||.||.||||||||.||
BL05157___ylb 100 CTTGAAAGCAACATGATTGAAAACGACAGCAACTCACCGTTTTACGGCAT 149
BSNT_02501___ 150 TTATTTTGGCGATAAA----CTTGTAGCACGAATGAGCCTGTATCAAGTT 195
.||||..|| ||| ||.||.|||.||||||||||||||.||||.
BL05157___ylb 150 CTATTACGG----AAATCGGCTCGTCGCAAGAATGAGCCTGTATAAAGTG 195
BSNT_02501___ 196 AACGGCAAATCGAATCCCTATTTTGACAACCGCCAGGATTATTTGGAGCT 245
.|.||.|||||.||.|..||||||||..|..||||.|||||..|.|||||
BL05157___ylb 196 GATGGTAAATCAAACCAATATTTTGAAGAAGGCCAAGATTACCTCGAGCT 245
BSNT_02501___ 246 GTGGAAGCTTGAGGTTCTTCCGGGCTACCAG---AACAGGGGATACGGGA 292
.|||||||||||.|||.|.|||||.||.||| ||| ||.|||||.|
BL05157___ylb 246 CTGGAAGCTTGAAGTTTTGCCGGGGTATCAGCGAAAC---GGCTACGGAA 292
BSNT_02501___ 293 -GAGCCTTGGTTGAATTTGCAAAATCATTCAAAATGCCGATCCGGACAAA 341
||..||| ||.||.||.||.|||||.|||..|.|.|||||.||.||||.
BL05157___ylb 293 CGATGCTT-GTGGAGTTCGCCAAATCTTTCGGACTCCCGATTCGCACAAG 341
BSNT_02501___ 342 TCCGAGAATGAAATCAGCGGAATTTTGGAACAAAATGAACTTTAAAACTG 391
||||.|..|.||||||.|.||.|||||||||||.|||..|||||.|.|.|
BL05157___ylb 342 TCCGCGCGTCAAATCATCCGATTTTTGGAACAAGATGGGCTTTACACCGG 391
BSNT_02501___ 392 TTAAGTATGATATGGCGCGGGACAAAGGGGAAAACCCGCTCATCTGGCAT 441
||||.||.||||||||.|||||.|||||||||||.||||||.|.||||||
BL05157___ylb 392 TTAAATACGATATGGCCCGGGATAAAGGGGAAAATCCGCTCGTTTGGCAT 441
BSNT_02501___ 442 CCTGATATGGATCACGAAATGACACCGGGA----------------GAGT 475
|||| ||| |.|| ||.|
BL05157___ylb 442 CCTG----------CGA---------GCGAACCTAGTCAAAGTTCTGAAT 472
BSNT_02501___ 476 CTGCATAG 483
|.|||||.
BL05157___ylb 473 CAGCATAA 480
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.