Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02788 and BL05174
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02788___miaA.1.5803.seq
# -bsequence dna-align/BL05174___miaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02788___miaA-BL05174___miaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02788___miaA-BL05174___miaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02788___miaA
# 2: BL05174___miaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 983
# Identity: 694/983 (70.6%)
# Similarity: 694/983 (70.6%)
# Gaps: 76/983 ( 7.7%)
# Score: 2247.5
#
#
#=======================================
BSNT_02788___ 1 TTGAATAATACGAAGCAGCCCGTTGTCATTTTAGTCGGACCGACGGCAGT 50
.|||||||.|||||||.|||.||..||.||||..||||||||||.||.||
BL05174___mia 1 GTGAATAAAACGAAGCCGCCGGTCATCGTTTTGATCGGACCGACCGCTGT 50
BSNT_02788___ 51 GGGGAAAACCAATTTAAGTATTCA-GCTAGCCAAATCCTTAAACGCAGAA 99
.||.|||||.||.||||| ..||| |||.|||.|....||.|||||.|||
BL05174___mia 51 CGGTAAAACAAAATTAAG-CGTCATGCTGGCCGAGCGTTTGAACGCGGAA 99
BSNT_02788___ 100 ATTATCAGCGGAGATTCGATGCAGATTTATAAAGGGATGGATATTGGAAC 149
||||||||||||||.||.|||||||||||.|||.|.||||||||.||.||
BL05174___mia 100 ATTATCAGCGGAGACTCAATGCAGATTTACAAAAGAATGGATATCGGCAC 149
BSNT_02788___ 150 AGCTAAAATTACCGAACAGGAGATGGAGGGAGTGCCCCATCATCTGATTG 199
|||.|||||.|..|||.||||.|||.|.||.||.||.|||||||||||.|
BL05174___mia 150 AGCAAAAATCAGAGAAGAGGAAATGAACGGGGTTCCGCATCATCTGATCG 199
BSNT_02788___ 200 ACATTTTAGATCCCCAAGAC----TCTTTCTC--TACTGCCGATTATCA- 242
|.|||..|||.|| ||| |||||||| || ||.||.|||||
BL05174___mia 200 ATATTAAAGAACC----GACGGAATCTTTCTCGGTA--GCTGAATATCAG 243
BSNT_02788___ 243 AAGCTTAGTAAGAAATAAAAT--CAGCGAGATTGCAAATAGAGGAAAGCT 290
.|| .|.||.|||.|.||||| || |||||||..|...||||.|||||
BL05174___mia 244 GAG-ATCGTCAGACAAAAAATTGCA--GAGATTGACAGGCGAGGGAAGCT 290
BSNT_02788___ 291 TCCGATGATTGTCGGTGGTACAGGGCTTTATATACAATCTGTGCTTTACG 340
|||||||||||||||.||.||.|||||.|||||.||.|||||.|||||||
BL05174___mia 291 TCCGATGATTGTCGGGGGAACCGGGCTCTATATCCAGTCTGTCCTTTACG 340
BSNT_02788___ 341 ATTATACATTTAC---GGAAG-AGGCAAATGATCCCGTGTTTCGAG-AGA 385
|.|||.||||.|| ||||| |||| |||||.|.|||.||.| .||
BL05174___mia 341 ACTATTCATTCACAGAGGAAGCAGGC----GATCCTGAGTTCCGGGCGGA 386
BSNT_02788___ 386 GCATGCAAGTGGCCGCTG---AGCGGGAAGGCGCTGACTTTCTTCATGCC 432
| |||.|.|.|..|.||| ||.|| ||.||.||.|.|.|||| |
BL05174___mia 387 G-ATGGAGGCGTTCTCTGCGAAGAGG---GGGGCCGAATATGTTCA---C 429
BSNT_02788___ 433 AAACTTGCTGCA-----GCAGATCCCGAGGCAGCAGCTGCGATTCATCCG 477
.|.||| .||.| || ||||||||.||.|||...||.||||||||.
BL05174___mia 430 GATCTT-TTGAAAGAACGC-GATCCCGAAGCGGCAAGAGCCATTCATCCA 477
BSNT_02788___ 478 AATAATACAAGAAGAGTCATTCGCGCACTGGAAATTTTACATACGTCTGG 527
|||||||.|.||||.|||||..|.||.||.|||||..|.|||||..|.||
BL05174___mia 478 AATAATAAACGAAGGGTCATCAGGGCGCTTGAAATCCTGCATACAACAGG 527
BSNT_02788___ 528 AAAAACGATGTCCCAGCAT-TTGAAGGAACA----AAAACGAGAACTTCT 572
|||||||||||||.|.||| |.||||| ||| || |||.|||.|
BL05174___mia 528 AAAAACGATGTCCGAACATATGGAAGG-ACAGCGGAA----AGAGCTTTT 572
BSNT_02788___ 573 GTACAATGCAGTGTTAATTGGCCTGACAATGGATAGAGACACGCTTTACG 622
.||||...|.|...|.||.||..||||.|||||..|.||...|||.||.|
BL05174___mia 573 ATACACGACGGCTCTCATCGGTTTGACGATGGAGCGGGAAGTGCTCTATG 622
BSNT_02788___ 623 AAAGAATTAATCAG-CGGGTCGATTTGATGATGGAGTCA-GGCCTTCTTC 670
|.||.||.|| ||| ||.||.||...||||||||| |.| ||.||.||..
BL05174___mia 623 ACAGGATCAA-CAGCCGCGTTGACCAGATGATGGA-TGAGGGGCTGCTGG 670
BSNT_02788___ 671 CGGAAGTGAAAC-GCTTATACGACAAGAACGTGAGAGACTGTCAATCAAT 719
..|||||||||| |||| ||.||..|.|||||.|||.||||.||.||..|
BL05174___mia 671 ATGAAGTGAAACTGCTT-TATGATGAAAACGTAAGAAACTGCCAGTCTGT 719
BSNT_02788___ 720 ACAGGCGATAGGCTATAAAGAGCTGTATGCATATTTTGACGGTTTTGTGA 769
.||||||||.|||||.||||||||.|||||..||.|.||.|| .|
BL05174___mia 720 CCAGGCGATCGGCTACAAAGAGCTTTATGCGCATCTCGAAGG------CA 763
BSNT_02788___ 770 CACTTTCC------GATGCTGTCGA-ACAGCTAAAGCAGAACTCGAGGCG 812
.|...||| ||.||.||.|| ||| .|.||||.|||.|||||.||
BL05174___mia 764 GAGCGTCCTTGGAAGAGGCGGTTGAGACA-TTGAAGCGGAATTCGAGACG 812
BSNT_02788___ 813 GTATGCGAAACGCCAGCTGACGTGGTTTCGCAACAAAATGCAGGTCACAT 862
.||.||.|||.|.||||||||.||||||.|.||..|||||.|.|||.|||
BL05174___mia 813 CTACGCCAAAAGGCAGCTGACATGGTTTAGAAATCAAATGGATGTCGCAT 862
BSNT_02788___ 863 GGTTCGATATGACACCGCCTGTTGATATGGAGCTGAAAAAAAAGGAAATT 912
||||.||.|||||.||.|||||..||||.||||.|||||||.||||||||
BL05174___mia 863 GGTTTGACATGACGCCCCCTGTCAATATCGAGCAGAAAAAACAGGAAATT 912
BSNT_02788___ 913 TTCACACATATAGCAGGAAAACTCGAACTTTAA 945
|||||..|.|||||||||||.||||||||||||
BL05174___mia 913 TTCACTTACATAGCAGGAAAGCTCGAACTTTAA 945
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