Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02791 and BL05176
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02791___ymzA.1.5803.seq
# -bsequence dna-align/BL05176___ymzA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02791___ymzA-BL05176___ymzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02791___ymzA-BL05176___ymzA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02791___ymzA
# 2: BL05176___ymzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity: 161/244 (66.0%)
# Similarity: 161/244 (66.0%)
# Gaps: 44/244 (18.0%)
# Score: 539.0
#
#
#=======================================
BSNT_02791___ 1 ATGAAGCATAAAGTGATCG---TGAATCATTGGGAAGAAATTTGCGAAGA 47
|||||.|.||| ||||| |.||.|||||||||||.|..||.|||||
BL05176___ymz 1 ATGAAACCTAA---GATCGTCATCAACCATTGGGAAGAGACGTGTGAAGA 47
BSNT_02791___ 48 TGATTCTTGCTATGAATACGGAACAAGTATCATTGTGAACGGAAAAGAAT 97
||||||.||||||||||||||.||||||||..|.||.|||||||||||..
BL05176___ymz 48 TGATTCCTGCTATGAATACGGCACAAGTATTCTCGTAAACGGAAAAGAGC 97
BSNT_02791___ 98 TAATCAGAGAAGCGTCAATTATCACTGCTTTGAAGGCGGTT-TTAGAAGA 146
|..||||.||||||||.||.||.||.|||.|..||.||||| ||| |.||
BL05176___ymz 98 TTGTCAGGGAAGCGTCGATCATGACGGCTGTTCAGTCGGTTCTTA-AGGA 146
BSNT_02791___ 147 GATCGGC------GCGGATGTTGAAATAGAAGAAACAGTA---GAGAGCG 187
..||||| ||.|||.|| |||.|| ||| ||||
BL05176___ymz 147 ACTCGGCATCGAAGCCGATATT-AAAGAG--------GTATGCGAGA--- 184
BSNT_02791___ 188 AAAAATGCTGTGATAGCTTAAGAAAAAAAAATCTAGACTACTAA 231
|.||.|||||||| .|||||..|||||.||
BL05176___ymz 185 ACAAGTGCTGTGA-CGCTTACAAAAAATAA-------------- 213
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