Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02957 and BL05188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02957___yneA.1.5803.seq
# -bsequence dna-align/BL05188___yneA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02957___yneA-BL05188___yneA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02957___yneA-BL05188___yneA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02957___yneA
# 2: BL05188___yneA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 217/347 (62.5%)
# Similarity: 217/347 (62.5%)
# Gaps: 70/347 (20.2%)
# Score: 572.5
#
#
#=======================================
BSNT_02957___ 1 ATGAGTAAAGAATCTATT-ATTTTTGTCGGTCTGTTCA---CAGTGATTT 46
||||..|||||||| ||| |||||||||.|||||||.| |.||||
BL05188___yne 1 ATGAAAAAAGAATC-ATTGATTTTTGTCAGTCTGTTTACTGCTGTGA--- 46
BSNT_02957___ 47 TGAGC-GCGGTTATCCT-TATGCTGTCATATAC----AAGCAGCGGCCAA 90
|.||| ||.| |||.|| |.|| ||||.|.|.| ||| |.|| ||
BL05188___yne 47 TCAGCTGCTG-TATTCTGTTTG-TGTCTTTTGCCGGTAAG-ATCG---AA 90
BSNT_02957___ 91 GAGCTTAATCAGTATGTTAAAATAGAAGTCCAGCAAGGCGACACACTTTG 140
||....||.||.|||||||||||||||||.||..|||||||.|||.|.||
BL05188___yne 91 GAAAGAAAGCAATATGTTAAAATAGAAGTGCAAGAAGGCGATACATTGTG 140
BSNT_02957___ 141 GTCAATTGCTGATCAGG--TAGCAGATACA-------AAAAA-----GAT 176
| ||.|.|| .|.|.||| || ||||| ||.
BL05188___yne 141 G---------GAGCTGGCCGACCGGAT-CAAAGGCGGAAAAACCGCTGAC 180
BSNT_02957___ 177 AAACAAAAATGATTTTATTGAATGGGTAGCTGATAAAAATCAA-CTTCAA 225
|||||.||| ||.||.||||||||.||.|||||||| ||| ||.|..
BL05188___yne 181 AAACACAAA----TTCATCGAATGGGTCGCCGATAAAAA-CAATCTGCCG 225
BSNT_02957___ 226 ACCTCTGATATCCAGCCGGGTGATGAGTTAGTGATCCCATTG-------- 267
|||||||..||..|.|||||.|||| |..|||||| ||
BL05188___yne 226 ACCTCTGTCATTAAACCGGGAGATG---TCTTGATCC---TGCCGGTAGC 269
BSNT_02957___ 268 -AAAAAGAAGCA-TCAGGATGCATATGAATTGGCAACTGTAAGATAG 312
||| .|||| || .|||..||||.|..|.|||..||||..|||.
BL05188___yne 270 CAAA---CAGCACTC-CGATCAATATCAGCTTGCAGTTGTAGAATAA 312
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