Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02958 and BL05189

See Amino acid alignment / Visit BSNT_02958 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence dna-align/BSNT_02958___yneB.1.5803.seq
#    -bsequence dna-align/BL05189___yneB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02958___yneB-BL05189___yneB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02958___yneB-BL05189___yneB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02958___yneB
# 2: BL05189___yneB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity:     457/671 (68.1%)
# Similarity:   457/671 (68.1%)
# Gaps:          40/671 ( 6.0%)
# Score: 1445.5
# 
#
#=======================================

BSNT_02958___      1 ATGAAAGCACTCATTTATGCCCGTGTAAGCACAAATAAAGAACAGCAGGA     50
                     |||||.||..|.|||||..||.|.||||||||....||.||.||||||||
BL05189___yne      1 ATGAATGCGATTATTTACACCAGGGTAAGCACTGCGAAGGAGCAGCAGGA     50

BSNT_02958___     51 AACGTCATTAAAGCGGCAGGAGGAGGAGCTTACGGCCATTGCAGCGGAGA    100
                     |||.||||||||||||||||||||.|||||||.|.|..||||.||.||..
BL05189___yne     51 AACCTCATTAAAGCGGCAGGAGGAAGAGCTTAAGTCGCTTGCCGCCGAAC    100

BSNT_02958___    101 ACGACATGGAAGTGGTCAAAGTGATTTCAGAAAAAGCCAGCGGATATGAA    150
                     |||..|||.|.||.||.|..||.|||||.||..|.||.||||||||||||
BL05189___yne    101 ACGGGATGAACGTCGTGAGCGTCATTTCCGAGCAGGCGAGCGGATATGAA    150

BSNT_02958___    151 ATGGATCGGGATGGTGTATTTGAGCTGCTTGATGAGATTAAGAAC-GCTG    199
                     |||||.||.||.||.||.||.||.|||||.||.||.||.|| ||| .|.|
BL05189___yne    151 ATGGACCGCGACGGCGTCTTCGATCTGCTCGAGGAAATCAA-AACATCAG    199

BSNT_02958___    200 GAATTGATGTCATTTTGGTTCAGGATGAGACAAGGCTCGGACGGGGAAAC    249
                     ..||.||.|...||||..|.||||||||.||..||||.|||.|.||.||.
BL05189___yne    200 ACATCGACGCGGTTTTAATACAGGATGATACGCGGCTTGGAAGAGGGAAT    249

BSNT_02958___    250 GCAAAAATCGCACTGCTTCATTGCATTTATAGAGAAGGTGTGAAAGTCTA    299
                     ||.|||||.||.||.|||||.||..|.||||.||||||.||..||.||||
BL05189___yne    250 GCCAAAATTGCCCTTCTTCACTGTTTATATAAAGAAGGCGTTCAAATCTA    299

BSNT_02958___    300 TACAACGGCTCATAGAGGTGAACTGGAGTTATCGGAGGCTGACTCAATGG    349
                     .||...||||||..|.||..|.||.|||.|.||.||.||.|||||.||||
BL05189___yne    300 CACGCTGGCTCACCGCGGAAAGCTCGAGCTTTCCGAAGCGGACTCGATGG    349

BSNT_02958___    350 TCTTGGAAATCGTCAGCATTGTGGAAGAGTATCAGCGAAAGATTCACAAC    399
                     |.|||||.||.|||.|||||||.||.||.||.|||||.||.||.||.|||
BL05189___yne    350 TTTTGGAGATTGTCGGCATTGTCGAGGAATACCAGCGGAAAATACATAAC    399

BSNT_02958___    400 ATGAAAATCAGACGGGGAATGAA-ACGTGCAGTAAAAAACGGTTTTAAAC    448
                     .|||||||.|..||||||||||| |.| ||.||..|||||||.|    ||
BL05189___yne    400 CTGAAAATTAAGCGGGGAATGAAGAAG-GCGGTCGAAAACGGCT----AC    444

BSNT_02958___    449 CGC----AAAAAAACTTAAAAAACCAACATGGGAA--CAGTGGAAAAGAA    492
                     |||    |.|..|||.|||||.|||...||  |||  |.|.||.|.|||.
BL05189___yne    445 CGCCCGGAGAGGAACCTAAAACACCGCAAT--GAAGGCGGCGGGAGAGAG    492

BSNT_02958___    493 AAAATAGAGGTGCCAATCTCTGAGATCGTCCGCCTAAGAGCGAATAAACT    542
                     ..|||.||.|.|||..|.||.||.||||||.|.||.||.|.|||.||.||
BL05189___yne    493 CGAATCGAAGCGCCTCTTTCAGAAATCGTCAGGCTCAGGGAGAACAAGCT    542

BSNT_02958___    543 GACGTTTGCTGAAATCGCGGCTACCC----TAAGAGGGTTTGGCTATGAT    588
                     |||||||||.||.||.||    |.||    |.|||||.||.||.||....
BL05189___yne    543 GACGTTTGCGGAGATTGC----AGCCGTGTTGAGAGGCTTCGGATACAGC    588

BSNT_02958___    589 GTCTCTAAAGCAACCGTTCACCGGCGTTTTCAGGAATACATAGAGAATGA    638
                     .|.||.|||||||||||||||||.||.|..|||||.||          .|
BL05189___yne    589 ATATCAAAAGCAACCGTTCACCGCCGCTACCAGGAGTA----------TA    628

BSNT_02958___    639 AGAGAC-----AGCAGAGTGA    654
                     || |||     .|||||.|.|
BL05189___yne    629 AG-GACGGCCTTGCAGACTAA    648


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