Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02973 and BL05190

See Amino acid alignment / Visit BSNT_02973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02973___sspP.1.5803.seq
#    -bsequence dna-align/BL05190___sspP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02973___sspP-BL05190___sspP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02973___sspP-BL05190___sspP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02973___sspP
# 2: BL05190___sspP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     120/150 (80.0%)
# Similarity:   120/150 (80.0%)
# Gaps:           6/150 ( 4.0%)
# Score: 463.0
# 
#
#=======================================

BSNT_02973___      1 ATGACCAATAAGAATACAA--GTAAAGATATGCATAAAAACGCCCCTAAA     48
                     .||||.||||  ||.||.|  |.||||||||||..||||||||.||.|||
BL05190___ssp      1 TTGACAAATA--AAAACGACGGCAAAGATATGCGCAAAAACGCACCGAAA     48

BSNT_02973___     49 GGA-CACAATCCCGGCCAACCTGAGCCTCTAAGCGGAAGCAAAAAAGTAA     97
                     ||| |.| |.||.||.||.||.||||||.|.|||||||||||||||||||
BL05190___ssp     49 GGAGCTC-AGCCGGGGCAGCCAGAGCCTTTGAGCGGAAGCAAAAAAGTAA     97

BSNT_02973___     98 AGAACCGAAACCATACAAGACAAAAGCACAACTCAAGCCATGATATGTAA    147
                     |.|||||.|||||||||||||||||.|||||.||.||.||.|||||||||
BL05190___ssp     98 AAAACCGGAACCATACAAGACAAAAACACAATTCCAGTCACGATATGTAA    147


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.