Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03449 and BL05242
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03449___spmB.1.5803.seq
# -bsequence dna-align/BL05242___spmB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03449___spmB-BL05242___spmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03449___spmB-BL05242___spmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03449___spmB
# 2: BL05242___spmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity: 422/537 (78.6%)
# Similarity: 422/537 (78.6%)
# Gaps: 0/537 ( 0.0%)
# Score: 1650.0
#
#
#=======================================
BSNT_03449___ 1 ATGGAAATCATCAACTGGCTGTCTTTAGCCATGATTCCAATCATTATTGC 50
.|||||.|||||||||||||.|||.|.|||.|.||.||..|.||.||.||
BL05242___spm 1 TTGGAATTCATCAACTGGCTTTCTCTGGCCCTTATCCCGTTTATCATCGC 50
BSNT_03449___ 51 CGGAATTCTTCTTTATGGAACGATCAAAAAGGTTCCGACATATGAATCGT 100
|...|||||.||.||.||.||..|||||||.||||||||.||||||.|||
BL05242___spm 51 CACGATTCTGCTATACGGTACATTCAAAAAAGTTCCGACTTATGAAGCGT 100
BSNT_03449___ 101 TTGTCGAAGGTGGGAAAGAGGGGATAGAAATTGCCTTTTCCATTATCCCC 150
||||.||.||.|||||.||.||.||..|||||||.||||||||||||||.
BL05242___spm 101 TTGTTGAGGGGGGGAAGGAAGGAATCCAAATTGCATTTTCCATTATCCCT 150
BSNT_03449___ 151 TATTTAGTCGGAATGCTTGTCGCTATAACTGTTTTCAGATCATCAGGCGC 200
|||||||||||.||||||||.||.||.||.||||||.|..|.|||||.||
BL05242___spm 151 TATTTAGTCGGTATGCTTGTAGCGATCACGGTTTTCCGGGCTTCAGGGGC 200
BSNT_03449___ 201 GCTTGATTTTATAATGGATCTTTTAAAACCGGCTTTCTCCGCTATCGGCA 250
|||.||||||.|.|||.||||||||||.||.|..||.|||||..|.||.|
BL05242___spm 201 GCTCGATTTTTTTATGAATCTTTTAAAGCCCGTGTTTTCCGCCGTGGGAA 250
BSNT_03449___ 251 TTCCTGCTGAAGTAGTGCCGCTTGCTCTGATCCGCCCGATCTCCGGTACG 300
||||..|.|||||.||.|||||.|||||||||||.|||||.||.||.|||
BL05242___spm 251 TTCCGACGGAAGTGGTTCCGCTGGCTCTGATCCGGCCGATTTCGGGAACG 300
BSNT_03449___ 301 GCCGCTCTCGGAATGACGACCGATTTAATTGCAGTATACGGGCCCGATTC 350
||.||.|||||.||||||||||||||.||.||.||.||||||||||||||
BL05242___spm 301 GCAGCGCTCGGCATGACGACCGATTTGATCGCCGTTTACGGGCCCGATTC 350
BSNT_03449___ 351 CTTTATCGGCAGGCTGGCTTCCGTCATGCAGGGATCTACAGATACAACGC 400
.||.||||||.|||||||.||.||||||||||||||.|||||.||.||.|
BL05242___spm 351 GTTCATCGGCCGGCTGGCCTCTGTCATGCAGGGATCGACAGACACGACTC 400
BSNT_03449___ 401 TTTACGTACTGACTGTGTATTTCGGAGCAGTCGGCATTAAAAAAATGGGT 450
|.|||||..||||.||.|||||||||||.|||||.||.||.||||||||.
BL05242___spm 401 TGTACGTTTTGACCGTCTATTTCGGAGCGGTCGGAATCAAGAAAATGGGG 450
BSNT_03449___ 451 GATGCATTAAAGGTGGGACTTCTTGCAGATTTAATCGGCGTAGTTGCATC 500
|||||.||||||||||||||.|||||.||||||...||.||..|.||.||
BL05242___spm 451 GATGCTTTAAAGGTGGGACTGCTTGCTGATTTAGCGGGGGTTATCGCGTC 500
BSNT_03449___ 501 TATCATCATCGTTACGTTATTATTTGGGAGCGCCTGA 537
|.|.||.||.||.||.||..|.|||||.|||||||||
BL05242___spm 501 TGTAATTATTGTAACATTGCTGTTTGGAAGCGCCTGA 537
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