Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02105 and BL05246
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_02105.1.5803.seq
# -bsequence dna-align/BL05246.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02105-BL05246.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02105-BL05246.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02105
# 2: BL05246
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 219/363 (60.3%)
# Similarity: 219/363 (60.3%)
# Gaps: 60/363 (16.5%)
# Score: 577.0
#
#
#=======================================
BSNT_02105 1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAA-CAGAAGGCTGTAG 49
|||||.||||||||...|||..|.|..|||||.||| ..||||....||
BL05246 1 ATGGGCACAAGAGTACATTACGCAGAAGAAGTAAAATGGGAAGTAATTA- 49
BSNT_02105 50 AAATGAGATTGGCAGGC-GTACCTATG------AAAGAGATCATGCAGGA 92
||||||.| ||.|| |.| ||| |||||.||.|||.|..|
BL05246 50 AAATGAAA----CAAGCTGGA---ATGACAAACAAAGAAATAATGGAACA 92
BSNT_02105 93 GTTGAATATCAAAAATAATACGCAGATTAAGACATGGGTCAGATGGTATA 142
..||...||.||||||||.||.||.|||||.||||||.|..|||||||.|
BL05246 93 ACTGGGGATAAAAAATAAGACTCAAATTAAAACATGGATGCGATGGTACA 142
BSNT_02105 143 AGGCTGGTGATACACATCGATTTGAACAGCCTGTTGGTAAGCAATACACT 192
|..|.||..|.||..||||||||...||.|..|||||.||.|||||..|.
BL05246 143 AAACAGGCCAAACCTATCGATTTTCGCAACAAGTTGGAAAACAATATTCC 192
BSNT_02105 193 TATGGAAAAGGTCCGGAGTATTCTTCCGAATTAGAG-------------- 228
||.||.||||...|||||.| |||.||.|
BL05246 193 TACGGTAAAGAATCGGAGGA--------AATGAGTGAGCTAGAAGAATTA 234
BSNT_02105 229 AAACTGCAGGCAGAGAATCGATATCTGAGA----CAACAG--AATGAAGT 272
||||| |.|||||..|.|.|| ||| |||..| |||.|
BL05246 235 AAACT------AAAGAATAAACAGCT-AGAGGCTCAATTGGCAATTA--- 274
BSNT_02105 273 GTTAAAAAAGTACAACGAATTGGAAAGGAAGTTGATAGCCAAACGTCA-- 320
|||||||||||.|.||..|.|||||| ||||| .|||||...||||
BL05246 275 --TAAAAAAGTACCAGGAGATCGAAAGG-AGTTG-GAGCCACGAGTCATT 320
BSNT_02105 321 GTCGAACTTGTAG 333
|||.||.||||||
BL05246 321 GTCCAAGTTGTAG 333
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