Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03498 and BL05248

See Amino acid alignment / Visit BSNT_03498 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence dna-align/BSNT_03498.1.5803.seq
#    -bsequence dna-align/BL05248.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03498-BL05248.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03498-BL05248.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03498
# 2: BL05248
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity:     177/232 (76.3%)
# Similarity:   177/232 (76.3%)
# Gaps:          11/232 ( 4.7%)
# Score: 656.0
# 
#
#=======================================

BSNT_03498         1 ATGGGAAGATTCCTGAAAACAGCTGTCGATGCAT--TGAAAGTTTTCATC     48
                     |||   |.|.|.||||||||.||.|.||||  ||  |.||.||.||..|.
BL05248            1 ATG---AAAATGCTGAAAACGGCCGCCGAT--ATGATCAAGGTGTTTGTG     45

BSNT_03498        49 CTGTTTACCGGTTTTACCGCTTTGTTCTATTATGCTATGATATGGGTGAA     98
                     |||||||||||||||||||..|||||.||||||||||||||||||.|.||
BL05248           46 CTGTTTACCGGTTTTACCGTCTTGTTTTATTATGCTATGATATGGATAAA     95

BSNT_03498        99 TCAAGAGTATGAAAACTATCATCGGTATGATAAACCGGAAGGCTCCGCTG    148
                     |..|||||||||||||||||||||||||||||||||.|||||..|.||..
BL05248           96 TTCAGAGTATGAAAACTATCATCGGTATGATAAACCTGAAGGAGCAGCCC    145

BSNT_03498       149 TAAAAGTTG--TTGAAATGGATCAGGATGAAAAAGGCGGATGGTTCGACC    196
                     |.||.||.|  |.|  |||||..||||.||..|.|||.|.|||||..|||
BL05248          146 TCAAGGTCGCCTCG--ATGGAAGAGGACGAGCAGGGCAGCTGGTTTAACC    193

BSNT_03498       197 GGTTGATCTTTTTTTACCAAAACGGGGAGTAG    228
                     ||||.|||||||||||....||||||||||||
BL05248          194 GGTTAATCTTTTTTTATTTGAACGGGGAGTAG    225


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