Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03676 and BL05265
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03676.1.5803.seq
# -bsequence dna-align/BL05265___yqzE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03676-BL05265___yqzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03676-BL05265___yqzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03676
# 2: BL05265___yqzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 132/193 (68.4%)
# Similarity: 132/193 (68.4%)
# Gaps: 23/193 (11.9%)
# Score: 411.0
#
#
#=======================================
BSNT_03676 1 GTGAAAACGAATGATTATGTTAAATATATGACGCAGCAATTTGTCAAATA 50
.||||||||||.|||||||||||||||||||||.|.||..|.||.|||||
BL05265___yqz 1 ATGAAAACGAACGATTATGTTAAATATATGACGGAACAGCTCGTAAAATA 50
BSNT_03676 51 TATAGATACTCCGAGAG-ATGAGCGAAAAGAACGAAAAGAGGTGCGGAAA 99
|||.||.||.||.| || |.||..||||||||...|||||....||.|||
BL05265___yqz 51 TATGGACACGCCTA-AGCAGGAAAGAAAAGAAATGAAAGAAAAACGTAAA 99
BSNT_03676 100 GAAACAAAAACGCC-TGCTTCCCAG-------CAGTGGTTCGGTATT-TT 140
|||..|||..|||| | |||| ||.||||||||.||| ||
BL05265___yqz 100 GAATTAAAGCCGCCGT-----CCAGGATATATCAATGGTTCGGCATTCTT 144
BSNT_03676 141 ACCCTATGGCT---TCCGGCTTTGGCTGAAACGGAAAAAATAA 180
.|||| ||||| ||..|.||| |.|||..|.|.||||||
BL05265___yqz 145 CCCCT-TGGCTGTATCATGTTTT---TTAAAAAGCATAAATAA 183
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