Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00351 and BL05281

See Amino acid alignment / Visit BSNT_00351 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence dna-align/BSNT_00351___adaA.1.5803.seq
#    -bsequence dna-align/BL05281___adaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00351___adaA-BL05281___adaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00351___adaA-BL05281___adaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00351___adaA
# 2: BL05281___adaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 705
# Identity:     356/705 (50.5%)
# Similarity:   356/705 (50.5%)
# Gaps:         213/705 (30.2%)
# Score: 892.0
# 
#
#=======================================

BSNT_00351___      1 ATGCCGGATAGTATCAATAACGGACATAAAGAGAGCCATGAGCATAGAAT     50
                                                          ||||.||...|||
BL05281___ada      1 -------------------------------------ATGAACAGCAAAT     13

BSNT_00351___     51 TTCGAATGATGCAGAAATGATAACAGATGAAAAGTGGCAAGCCATTATAA    100
                     ..|||.|||.||              .|||||.|||||..||.||||...
BL05281___ada     14 CACGATTGACGC--------------CTGAAATGTGGCGGGCGATTACGG     49

BSNT_00351___    101 ATAATGATGCAGCGTACAATAATC--AATTTTT--CTACGCTGTAAAATC    146
                     |.||.|||.|.||.||..|    |  |.|||||  .|||||.||.|||.|
BL05281___ada     50 AAAACGATTCCGCCTATGA----CGGAGTTTTTTATTACGCGGTCAAAAC     95

BSNT_00351___    147 GACAGGGATATTCTGTAAACCATCCTGTAAATCTCGCGTTCCGAAAAAAG    196
                     |||.||.|||||.||....||.|||||.|||||..|.||||||.|||..|
BL05281___ada     96 GACCGGCATATTTTGCCGCCCTTCCTGCAAATCGAGAGTTCCGCAAATCG    145

BSNT_00351___    197 AAAATGT--ATGTATTTTTCCAAACGCAGAACAAGCTCTCCGCGCAAAT-    243
                     |.|||||  |..|.||||||  ||.|||.||.|.|||.|        || 
BL05281___ada    146 ACAATGTGCAGATCTTTTTC--AATGCAAAAGATGCTTT--------ATC    185

BSNT_00351___    244 -------TTTCGCCCTTGTAAACGTTGCAAGC-----------CTACT--    273
                            |..|||||.||.|||||.|||||.|           ||.||  
BL05281___ada    186 AGAAGGGTACCGCCCCTGCAAACGCTGCAATCCGGCCGGGGCGCTGCTGC    235

BSNT_00351___    274 --AATGAAAAAATGCCTGATAGCGAGTGGGTTGATCTAATTACTGAATAC    321
                       .|||||.|..||.|  |.||||.||||  ||           |||..|
BL05281___ada    236 CGGATGAAGAGCTGGC--ACAGCGTGTGG--TG-----------GAAATC    270

BSNT_00351___    322 ATTGATAAAAATTTCACAGAAAAATTAACG-------------CTAGAAT    358
                     ||.|             ||.||..|||.||             ||..||.
BL05281___ada    271 ATCG-------------AGGAATCTTATCGCGATCCGCTGTCTCTGCAAG    307

BSNT_00351___    359 CGTTAGCAGATATTTGTCATGGGAGTCCGTATCATATGCATCGAACATTT    408
                     |.||.||.||.|..||.|||...||.||.|.|||..||||.||.||||||
BL05281___ada    308 CTTTGGCTGACAGGTGCCATATCAGCCCTTTTCACCTGCAGCGGACATTT    357

BSNT_00351___    409 AAAAAGATTAAAGGCATTACCCTGGTTGAGTATAT-----ACAACAAGTT    453
                     |||...||.||||||.|..|.|.||..||.||.||     |.||.|.|.|
BL05281___ada    358 AAACGAATCAAAGGCGTCTCGCCGGCAGAATACATCCTGCAGAAAAGGAT    407

BSNT_00351___    454 AGAGTACACGCGGCTAAAAAG-----TATTTG-------ATTCAGACAAA    491
                     .|||             ||||     .|||||       ||||||     
BL05281___ada    408 TGAG-------------AAAGCGGTCGATTTGCTTGCTCATTCAG-----    439

BSNT_00351___    492 TAA--ATCGATTGGAGATATCGCTAT--ATGTGTGGGTATAGCTAACGCG    537
                      ||  ||||||.|.|||.|||||| |  ||| ||.||.||.||.||.|||
BL05281___ada    440 -AACGATCGATCGCAGAAATCGCT-TCAATG-GTAGGCATTGCGAATGCG    486

BSNT_00351___    538 CCTTATTTTATTACTTTATTTAAAAAGAAAACTGGACA------GACACC    581
                     ...||||||....||||.|||||||||||.|||||.||      |||..|
BL05281___ada    487 GAATATTTTGCCTCTTTGTTTAAAAAGAAGACTGGGCAATCGCCGACGTC    536

BSNT_00351___    582 AGCACAATTTCGTCAAATGAGTAAAATGGAGGAAACGTACAATGGAAACA    631
                      |.||     ||.||||||    |||.|||||.||               
BL05281___ada    537 -GTAC-----CGGCAAATG----AAACGGAGGTAA---------------    561

BSNT_00351___    632 AATAA    636
                          
BL05281___ada    561 -----    561


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