Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03999 and BL05288
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_03999___aspS.1.5803.seq
# -bsequence dna-align/BL05288___aspS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03999___aspS-BL05288___aspS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03999___aspS-BL05288___aspS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03999___aspS
# 2: BL05288___aspS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1827
# Identity: 1374/1827 (75.2%)
# Similarity: 1374/1827 (75.2%)
# Gaps: 96/1827 ( 5.3%)
# Score: 5113.0
#
#
#=======================================
BSNT_03999___ 1 TTGTTTGGAAGAACATATTATTGCGGTGATATAACTGAAAAAGCAATTGG 50
|||||||||.||||.||||||||.||.||.|||||.||.||.||.||.||
BL05288___asp 1 TTGTTTGGACGAACGTATTATTGTGGCGAAATAACGGAGAAGGCGATCGG 50
BSNT_03999___ 51 CGAATCTGTAACG--CTGAAAGGCTGGGTCCAAAAAAGACGAGACCTCGG 98
.|||.|.|| || .|.|||||.|||||.|||||||||||.||.||.||
BL05288___asp 51 AGAAACCGT--CGTTTTAAAAGGATGGGTTCAAAAAAGACGCGATCTTGG 98
BSNT_03999___ 99 CGGATTGATTTTTATTGACTTGCGTGACCGTACGGGAATTGTTCAAGTCG 148
.||.||||||||||||||.|||.|.||.|||||.||.|||||.||.||||
BL05288___asp 99 AGGCTTGATTTTTATTGATTTGAGAGATCGTACCGGCATTGTGCAGGTCG 148
BSNT_03999___ 149 TTTTCAACCCCGATGTGTCAAAAGAAGCGCTTGCTGTTGCGGAAGGCATC 198
|.||.||.||.||.||.||.|||||.||.||.|.....||.|||.|||||
BL05288___asp 149 TATTTAATCCAGACGTTTCCAAAGACGCCCTGGAAACAGCTGAAAGCATC 198
BSNT_03999___ 199 AGAAATGAATACGTGCTTGATGTTCAAGGAAAAGTAGTGGCGCGGGAAGA 248
.|.|..|||||.||||||||..||..|||.|||||.||.||.||.|||||
BL05288___asp 199 CGCAGCGAATATGTGCTTGACATTACAGGCAAAGTCGTTGCCCGTGAAGA 248
BSNT_03999___ 249 AGGAACAGTCAATCCGAATTTGAAGACAGGTGCGATCGAAATTCACGCTA 298
||.||||||||||||.||.||||||||.||...||||||||||||.|
BL05288___asp 249 AGCAACAGTCAATCCAAACTTGAAGACCGGAAGGATCGAAATTCAGG--- 295
BSNT_03999___ 299 ACGGAGTGACAGTA------CTAAGTGCTGCAAAGACGCCTCCATTTGCG 342
||||.| |.||| ||.|||||.||.||.||||||||.||||||
BL05288___asp 296 -CGGAAT--CGGTAGATGTGCTGAGTGCGGCCAAAACGCCTCCTTTTGCG 342
BSNT_03999___ 343 ATTTCTGATCAAGCAGAAGAAGTGTCAGAGGACGTTCGTTTAAAACACCG 392
||....||.||.||.|.||||||.||.||.|||.|..|.|||||.|||||
BL05288___asp 343 ATCAGCGACCAGGCTGCAGAAGTATCTGAAGACATCAGATTAAAGCACCG 392
BSNT_03999___ 393 TTACTTAGATTTGCGCAGACCGGCTATGTTTCAA-ACGATGCAGATGCGT 441
.||..|.||.||||||.|.||||..||| ||||| .|..||.|.|||||.
BL05288___asp 393 CTATCTCGACTTGCGCCGTCCGGAGATG-TTCAACTCCCTGAAAATGCGC 441
BSNT_03999___ 442 CATAATGTGACGAAAGCTGTCCGCAGCTTTTTAGATGAAAACGGGTTTCT 491
|||||.||.||.||||||||||||.|||||||.|||||.|||||.|||||
BL05288___asp 442 CATAACGTCACAAAAGCTGTCCGCCGCTTTTTGGATGACAACGGCTTTCT 491
BSNT_03999___ 492 TGATATTGAAACGCCGATTTTAACAAAAAGCACGCCTGAAGGCGCACGTG 541
|||||||||||||||..||||||||||||||||||||||||||||.||.|
BL05288___asp 492 TGATATTGAAACGCCTGTTTTAACAAAAAGCACGCCTGAAGGCGCGCGCG 541
BSNT_03999___ 542 ACTA-CTTGGTGCCGAGCCGTGTGCACGAAGGTGAGTTCTACGCGCTGCC 590
|||| ||| ||.||||||||.|||||.|||||.||.||.||.|||||.||
BL05288___asp 542 ACTATCTT-GTACCGAGCCGGGTGCATGAAGGGGAATTTTATGCGCTTCC 590
BSNT_03999___ 591 GCAGTCTCCGCAGCTATTTAAACAGCTTCTGATGGTATCAGGCATTGAAC 640
|||.||||||||..|.|||||.|||||..|||||||.|||||..||||.|
BL05288___asp 591 GCAATCTCCGCAAATCTTTAAGCAGCTCTTGATGGTGTCAGGGTTTGACC 640
BSNT_03999___ 641 GGTATTATCAGATTGCCCGCTGTTTCCGTGATGAAGACTTGCGTGCGGAC 690
|.||||||||.||.||||||||.|||.|.|||||.|||.||||.||.|||
BL05288___asp 641 GCTATTATCAAATCGCCCGCTGCTTCAGGGATGAGGACCTGCGCGCCGAC 690
BSNT_03999___ 691 CGCCAGCCTGAGTTCACGCAAATTGATATTGAAATGTCCTTTATGAGCCA 740
||.|||||||||||.||||||||.|||||.||||||||.|||||||||||
BL05288___asp 691 CGTCAGCCTGAGTTTACGCAAATCGATATCGAAATGTCATTTATGAGCCA 740
BSNT_03999___ 741 GGAAGACATTATG------TCATTGGCTGAGGATATGATGGCAAAGATTA 784
|||||||||.||| ||| ||.||.||||||||..|..|.|
BL05288___asp 741 GGAAGACATCATGAAGCTCTCA------GAAGAAATGATGGCGCATGTGA 784
BSNT_03999___ 785 TGCGTGAAACAAAAGGCGTGGAAATTAAGCTTCCTCTTCCCAGAATGACG 834
||||||||||..|.|||.|.|||||...||||||.|||||.||||||.||
BL05288___asp 785 TGCGTGAAACGCACGGCATTGAAATCTCGCTTCCGCTTCCTAGAATGTCG 834
BSNT_03999___ 835 TATGACGAAGCAATGAACAAGTACGGTTCTGATAAACCGGATACGCGTTT 884
|||||.||.|||||||||...|||||.||.||.||||||||||||||.||
BL05288___asp 835 TATGAGGATGCAATGAACCGATACGGCTCAGACAAACCGGATACGCGCTT 884
BSNT_03999___ 885 TGACATGCTTTTGACAGATGTGTCTGA--CATTGTGAAGGATACGGAATT 932
.|.||||||.|||||.||||||||.|| || |||||||||.||||.||
BL05288___asp 885 CGGCATGCTGTTGACGGATGTGTCAGAAGCA--GTGAAGGATTCGGACTT 932
BSNT_03999___ 933 TAAAGTATTCTCATCAGCTGTAGCAAACGGCGGTGTGGTCAAAGCCATCA 982
||||||.|||.|.||.|||||.||.||||||||.|.||||||.||.||||
BL05288___asp 933 TAAAGTGTTCGCTTCGGCTGTGGCGAACGGCGGAGCGGTCAAGGCGATCA 982
BSNT_03999___ 983 ACGTAAAAGGCGGTGCCGGCGATTACTCCAGAAAAGACATCGATGCTCTT 1032
|.||||||||.|..||.|...|.|||||..|.|||||.||||||||.|||
BL05288___asp 983 ATGTAAAAGGAGCCGCTGCAAACTACTCTCGCAAAGATATCGATGCGCTT 1032
BSNT_03999___ 1033 GGCGCTTTTGCTGCAAACTATGGGGCGAAAGGACTTGCCTGGGTGAAAGT 1082
||.|..||.||||||||||||||.||.|||||.||.||.|||.|||||..
BL05288___asp 1033 GGAGAGTTCGCTGCAAACTATGGAGCAAAAGGGCTGGCTTGGCTGAAAAC 1082
BSNT_03999___ 1083 TGAAGCAGACGGAGTGAAAGGACCGATCGCTAAATTCTTTGATGAAGAAA 1132
.|||||.||.|||.|.|||||||||||.||.||.||.||||..|..||||
BL05288___asp 1083 AGAAGCGGATGGACTTAAAGGACCGATTGCGAAGTTTTTTGCCGGCGAAA 1132
BSNT_03999___ 1133 AGCAGTCTAAG---CTGATTGAAGCACTTGATGCTGCTGAAGGTGATTTG 1179
|.||| .|| ||..||.|.||.|||||.||.||.||.||.|||.||
BL05288___asp 1133 AACAG---GAGGCACTTGTTCAGGCGCTTGACGCCGCAGACGGGGATCTG 1179
BSNT_03999___ 1180 TTGCTGTTCGGAGCGGATCAA-TTTGAAGTTGTGGCCGC--AT----CAC 1222
.|.||.||.|..||.|| ||| .|.||||| ||| || |.|
BL05288___asp 1180 CTTCTCTTTGTGGCCGA-CAAGCTCGAAGT------CGCCAATGACGCGC 1222
BSNT_03999___ 1223 TCGGCGCGCTGCGTTTAAAGCTTGGGAAAGAGCGCGGGCTGATTGACGAA 1272
|.||.|||||.||||||||||||||.|||||||.....|||||.||.|||
BL05288___asp 1223 TGGGAGCGCTTCGTTTAAAGCTTGGTAAAGAGCTGAACCTGATCGATGAA 1272
BSNT_03999___ 1273 AACCTGTTCAATTTCTTATGGGTCATTGACTGGCCGCTATTAGAGCATGA 1322
|.|.||||.||.|||||||||||..|.|||||||||||..|.|||.|.||
BL05288___asp 1273 AGCTTGTTTAACTTCTTATGGGTTGTCGACTGGCCGCTTCTTGAGTACGA 1322
BSNT_03999___ 1323 TCCTGAGGAAGGCCGTTTCTACGCAGCGCACCATCCGTTCACAATGCCTG 1372
|.|||||||||||||.|.|||.||.||.|||||.||||||||||||||||
BL05288___asp 1323 TGCTGAGGAAGGCCGCTACTATGCCGCACACCACCCGTTCACAATGCCTG 1372
BSNT_03999___ 1373 TCCGGGAAGACCTTGAGCTGATTGAAACAGCGCCTGAA-------GACAT 1415
||.|.||.||.||..|||||||.||.|| ||| |||||
BL05288___asp 1373 TCAGAGAGGATCTCAAGCTGATCGAGAC-------GAATCCGCAGGACAT 1415
BSNT_03999___ 1416 GAAAGCACAAGCTTATGACCTCGTCTTAAACGGCTATGAGCTTGGCGGCG 1465
||||||.||.|||||.|||||.|||.|||||||||||||.||||||||||
BL05288___asp 1416 GAAAGCGCAGGCTTACGACCTTGTCCTAAACGGCTATGAACTTGGCGGCG 1465
BSNT_03999___ 1466 GTTCAATCCGTATTTTCGAAAAGGATATTCAGGAAAAAATGTTTGCGCTT 1515
|.||.|||||||||||.|||||.||..|||||||.||||||||||..|||
BL05288___asp 1466 GCTCGATCCGTATTTTTGAAAAAGACGTTCAGGAGAAAATGTTTGGCCTT 1515
BSNT_03999___ 1516 CTCGGCTTCTCACCAGAAGAAGCGGCTGAACAGTTCGGATTCCTGCTGGA 1565
||||||||.|||..||||||||||...||.||.|||||.||||||||.||
BL05288___asp 1516 CTCGGCTTTTCAGAAGAAGAAGCGAAGGAGCAATTCGGGTTCCTGCTCGA 1565
BSNT_03999___ 1566 AGCATTTGAATACGGCGCTCCTCCGCACGGCGGAATCGCACTTGG-CTTA 1614
.||.|||||.|||||.|||||||||||.||||||||.||.||.|| |||
BL05288___asp 1566 GGCTTTTGATTACGGGGCTCCTCCGCATGGCGGAATTGCGCTCGGTCTT- 1614
BSNT_03999___ 1615 GACCGTCTCGTTATGCTTCTC-GCAGGACGTACGAACCTGAGAGATACGA 1663
|||.|.||.||.|||||.||| || ||.||||||||..||||.|||||||
BL05288___asp 1615 GACAGGCTGGTGATGCTGCTCAGC-GGCCGTACGAATTTGAGGGATACGA 1663
BSNT_03999___ 1664 TTGCATTCCCGAAAACGGCAAGTGCAAGCTGCCTGATGACAGAGGCGCCT 1713
|.|||||.|||||||||||.||.|||||||||||||||||.||.|||||.
BL05288___asp 1664 TCGCATTTCCGAAAACGGCCAGCGCAAGCTGCCTGATGACCGAAGCGCCA 1713
BSNT_03999___ 1714 GGAGAAGTAAGCGAC---GCTCAGCTTGACGAGCTTCATCTTTCTATCAA 1760
.|.||.|| |||| |||||||||||.|||||.||.|||...|||||
BL05288___asp 1714 AGCGAGGT---CGACAATGCTCAGCTTGATGAGCTGCACCTTGAAATCAA 1760
BSNT_03999___ 1761 --GAAAAA------AGTTAAGAACTGA 1779
|.|||| |||.|
BL05288___asp 1761 ACGCAAAATTCGACAGTAA-------- 1779
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