Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04001 and BL05289

See Amino acid alignment / Visit BSNT_04001 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_04001___yrzK.1.5803.seq
#    -bsequence dna-align/BL05289___yrzK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04001___yrzK-BL05289___yrzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04001___yrzK-BL05289___yrzK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: BL05289___yrzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:     113/181 (62.4%)
# Similarity:   113/181 (62.4%)
# Gaps:          26/181 (14.4%)
# Score: 301.0
# 
#
#=======================================

BSNT_04001___      1 ATGAAATATCATCCAAAAATGGGACGTGCATTTCACGACGGTGAAGCGAA     50
                     ||||..|||.|||.||.||||||..|.||..|.||.||....||.|||||
BL05289___yrz      1 ATGAGGTATAATCAAAGAATGGGCAGGGCGATCCATGAGCAAGATGCGAA     50

BSNT_04001___     51 TCTGCAT-TACAGCGATCACGCAGATCCCGATACGA-----CTGGTTATC     94
                     ||||||| ||.|| ||.||.||.|| ||||    ||     |.||    |
BL05289___yrz     51 TCTGCATCTAAAG-GAGCATGCGGA-CCCG----GAGCGCGCCGG----C     90

BSNT_04001___     95 TT-ACG---GAAACAGCATCTGAATTTGGTCTTATGTCCAAAGAAGCAGC    140
                     || |.|   |||||.||..||||..|.||.||.|.||||||||||.||..
BL05289___yrz     91 TTCATGGAAGAAACGGCCACTGAGCTGGGGCTGACGTCCAAAGAATCAAT    140

BSNT_04001___    141 GCTGAGGAAAAACAACCGGAATAAAGCTTGA    171
                     .|.||..|||||.|||||.|| |.||     
BL05289___yrz    141 TCAGAATAAAAAGAACCGCAA-ATAG-----    165


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