Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04466 and BL05307

See Amino acid alignment / Visit BSNT_04466 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_04466___ytjA.1.5803.seq
#    -bsequence dna-align/BL05307___ytjA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04466___ytjA-BL05307___ytjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04466___ytjA-BL05307___ytjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04466___ytjA
# 2: BL05307___ytjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity:     175/233 (75.1%)
# Similarity:   175/233 (75.1%)
# Gaps:          10/233 ( 4.3%)
# Score: 640.0
# 
#
#=======================================

BSNT_04466___      1 ATGAAAACCCTATTCATCGCT-CTGATCAGAGGATATCAAAAATTCATCT     49
                     |||||||||.|||||.| ||| ||.|||.|....||||||||||..||.|
BL05307___ytj      1 ATGAAAACCGTATTCCT-GCTGCTCATCCGCTTTTATCAAAAATGGATAT     49

BSNT_04466___     50 C----GCCCCTGACACCGCCAACGTGCCGCTTTTATCCGACCTGTTCCCA     95
                     |    ||.|.|    |||||.||.|||||.|||||||||||.||.|||.|
BL05307___ytj     50 CACCGGCTCTT----CCGCCGACCTGCCGTTTTTATCCGACATGCTCCAA     95

BSNT_04466___     96 ATATGGAATCGAAGCGATTAAAACACATGGCGCTTTAAAAGGCGGATGGC    145
                     .||.||..|.||||||||..|||..||.|||||.||.|||||||||||||
BL05307___ytj     96 TTACGGTCTTGAAGCGATCGAAAAGCACGGCGCATTTAAAGGCGGATGGC    145

BSNT_04466___    146 TGACAATCAAACGGATTTTGAAATGCCACCCGTTCCATCCGGGAGGAGTC    195
                     |.||.|||||.||||||.|.||||||||.|||||.|||||.||.|||.|.
BL05307___ytj    146 TCACCATCAAGCGGATTCTAAAATGCCATCCGTTTCATCCCGGCGGAATA    195

BSNT_04466___    196 GATCCCGTTCCTGAAAAGAAACAAAAACATTAA    228
                     |||||||||||.|||||.||.|||||..||||.
BL05307___ytj    196 GATCCCGTTCCGGAAAAAAAGCAAAAGGATTAG    228


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