Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04471 and BL05311

See Amino acid alignment / Visit BSNT_04471 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_04471___ythC.1.5803.seq
#    -bsequence dna-align/BL05311.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04471___ythC-BL05311.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04471___ythC-BL05311.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04471___ythC
# 2: BL05311
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     120/165 (72.7%)
# Similarity:   120/165 (72.7%)
# Gaps:           9/165 ( 5.5%)
# Score: 434.0
# 
#
#=======================================

BSNT_04471___      1 ATGGAGCAGAAAATTCTATGTGAGGTCAACAACTGTTCTTATTGGGGCAA     50
                     ||||||||.|||||.||.|||||.||||.||||||..|.|||||||...|
BL05311            1 ATGGAGCAAAAAATACTGTGTGAAGTCAGCAACTGCACCTATTGGGAAGA     50

BSNT_04471___     51 AGGTAACAAATGCACCGCTGATACCATTTATGTTGTCAGCCATACT---G     97
                     .||||||||||||||.||.||..||||.|||||.|||||||||.||   |
BL05311           51 GGGTAACAAATGCACAGCCGACGCCATCTATGTCGTCAGCCATGCTGAAG    100

BSNT_04471___     98 GTGAAACGGCTGAAAACAGCCGGGAAACAGACTGCAAAACGTTTAAGCC-    146
                     ||||||..|||...||.||....|||||.||.||||||||.|||||.|| 
BL05311          101 GTGAAAAAGCTTCTAATAGTGAAGAAACGGATTGCAAAACCTTTAAACCT    150

BSNT_04471___    147 --GCATGATTTATAA    159
                       .|||.|||.|   
BL05311          151 GAACATCATTAA---    162


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