Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04869 and BL05328
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04869.1.5803.seq
# -bsequence dna-align/BL05328.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04869-BL05328.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04869-BL05328.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04869
# 2: BL05328
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity: 117/168 (69.6%)
# Similarity: 117/168 (69.6%)
# Gaps: 27/168 (16.1%)
# Score: 428.0
#
#
#=======================================
BSNT_04869 1 ATGGTACGAGAGAAAAAAAATCCGTCTTCAGCGGCAGTCAGCGCGGCGAG 50
.|||||||.||.|.|||||||||.|||||.||.|||||||||||.||.||
BL05328 1 TTGGTACGTGAAAGAAAAAATCCATCTTCTGCCGCAGTCAGCGCCGCAAG 50
BSNT_04869 51 CGTAAAGGGAGATGCCGGTCCGACTCAGCATT--------ACGG----CG 88
|.||||.||..||||.||||| |.||| |||| .|
BL05328 51 CATAAAAGGCAATGCAGGTCC------GGATTATAAAAAGACGGATGCGG 94
BSNT_04869 89 GCGGAAAACGGACAAGTCAAAATCAGCAGTATAAAAAACATAACATGGA- 137
||||.|||||||||||.|||||.|||||.||||||||.|||||.|||||
BL05328 95 GCGGTAAACGGACAAGCCAAAACCAGCAATATAAAAAGCATAATATGGAT 144
BSNT_04869 138 -------ACAATCA-TAA 147
|..|||| |||
BL05328 145 GTTCCTGAAGATCACTAA 162
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