Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05469 and BL05353
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence dna-align/BSNT_05469___ywtC.1.5803.seq
# -bsequence dna-align/BL05353___pgsE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05469___ywtC-BL05353___pgsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05469___ywtC-BL05353___pgsE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: BL05353___pgsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 114/177 (64.4%)
# Similarity: 114/177 (64.4%)
# Gaps: 18/177 (10.2%)
# Score: 324.0
#
#
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BSNT_05469___ 1 ATGAAATTTGTCAAAGCTATCTGGCCGTTTGTTGCCGTAGCCATCGTGTT 50
|||||||||||||.|||.||.||||||||.||.|...||| |..||.|
BL05353___pgs 1 ATGAAATTTGTCAGAGCCATTTGGCCGTTCGTAGGTTTAG---TTTTGAT 47
BSNT_05469___ 51 CAT---GTTTATGTCAGCTTTTAA--ATTCAATGATCAGCTGACAGATCA 95
||| .||.|||||.|||||.|| |||| ||||.|..||.||.|..|
BL05353___pgs 48 CATTGCATTCATGTCTGCTTTCAAGTATTC--TGATGAATTGTCAAACGA 95
BSNT_05469___ 96 GGAAAAACAGAAGATTGATATGGAAATGAATAAAATCCAACAGCAGG--- 142
.||||||...||.||...||.|||.||..|.|||.|..|.|||||||
BL05353___pgs 96 TGAAAAAGCTAAAATCTCTACGGAGATCCAAAAAGTGAATCAGCAGGATC 145
BSNT_05469___ 143 -AAGAACCGGTAAATGCCAATAAATAA 168
||.|||.|..|| |||..|||||
BL05353___pgs 146 AAACAACAGAAAA----CAAGCAATAA 168
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