Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03508 and BL05377

See Amino acid alignment / Visit BSNT_03508 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence dna-align/BSNT_03508___ansA.1.5803.seq
#    -bsequence dna-align/BL05377___ansA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03508___ansA-BL05377___ansA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03508___ansA-BL05377___ansA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03508___ansA
# 2: BL05377___ansA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1011
# Identity:     728/1011 (72.0%)
# Similarity:   728/1011 (72.0%)
# Gaps:          42/1011 ( 4.2%)
# Score: 2541.0
# 
#
#=======================================

BSNT_03508___      1 ATGAAAAAATTATTGATGTTGACAACTGGGGGAACGATTGCTTCAGTTGA     50
                     ||||||||.|||.||.|||||||.||.||.||.||.||.||||||||.||
BL05377___ans      1 ATGAAAAAGTTACTGCTGTTGACCACCGGCGGGACCATCGCTTCAGTAGA     50

BSNT_03508___     51 AGGGGAAAATGGGCTGGCTCCCGGAGTCAAGGCTGATGAATTATTAAGTT    100
                     |||.|||||.||.||||||||.||.||.||.||.||.||..|..|.||.|
BL05377___ans     51 AGGCGAAAACGGACTGGCTCCGGGGGTTAAAGCGGAAGAGCTTCTCAGCT    100

BSNT_03508___    101 ACGTATCAAAACTTGAT-----AACGATTACACAATGGAAACTCAGTCGC    145
                     |..||||..|   ||||     ||  ||||.||.||.||....||.||..
BL05377___ans    101 ATTTATCTGA---TGATCATTCAA--ATTATACGATAGATTGCCAATCTT    145

BSNT_03508___    146 TTATGAATATAGACAGCACCAATATGCAGCCTGAATACTGGGTGGAAATA    195
                     |.|||.||||||||||||||||.||||||||||||.||||||||...||.
BL05377___ans    146 TAATGGATATAGACAGCACCAACATGCAGCCTGAACACTGGGTGATGATG    195

BSNT_03508___    196 GCGGAAGCCGTTAAGGAAAATTATGATGC--CTATGACGGGTTTGTTATT    243
                     ||.||.||.||..|.||||||||  ..||  |||.|||||.|||||.||.
BL05377___ans    196 GCTGAGGCTGTATATGAAAATTA--CAGCCGCTACGACGGCTTTGTGATC    243

BSNT_03508___    244 ACTCACGGTACAGATACAATGGCCTATACATCTGCCGCACTATCGTATAT    293
                     ||.|||||.||.|||||.||||||||.||.||.||.||.||.||.||.||
BL05377___ans    244 ACGCACGGAACCGATACGATGGCCTACACCTCAGCGGCGCTTTCATACAT    293

BSNT_03508___    294 GCTGCAGCATGCCAAAAAGCCGATTGTCATCACCGGATCGCAGATTCCGA    343
                     |||||||.||....|.|||||..|.|..||.||.||.||.||..||||||
BL05377___ans    294 GCTGCAGAATATTGATAAGCCCGTCGCGATTACGGGTTCCCAAGTTCCGA    343

BSNT_03508___    344 TCACGTTCCAAAAAACCGATGCTAAAAAAAATATTACAGATGCCATTCGA    393
                     |.|||||..|.|||||.|||||.|||||||||||.|.||||||..|.||.
BL05377___ans    344 TTACGTTTAAGAAAACGGATGCGAAAAAAAATATAAAAGATGCGGTCCGC    393

BSNT_03508___    394 TTTGCCTGTGAAGGCGTGGGCGGCGTTTATGTTGTATTTGACGGCAGAGT    443
                     |||||.||.||.|||.|.|||||.||.|||||.||.|||||||||.|.||
BL05377___ans    394 TTTGCGTGCGACGGCATCGGCGGAGTATATGTCGTCTTTGACGGCCGCGT    443

BSNT_03508___    444 CATTCAGGGAACGCGTGCGATCAAATTAAGAACGAAAAGCTACGACGCAT    493
                     ||||...||.|||.|.|||||||||||||||||.|||||||||||.||||
BL05377___ans    444 CATTTTAGGCACGAGAGCGATCAAATTAAGAACAAAAAGCTACGATGCAT    493

BSNT_03508___    494 TTGAAAGCATCAATTACCCATATATCGCTTTTATCAATGAAGACGGGATC    543
                     ||||||||||||||||.||.||.||||||||.||..|.||..|.|..|||
BL05377___ans    494 TTGAAAGCATCAATTATCCTTACATCGCTTTCATTCACGATAAGGAAATC    543

BSNT_03508___    544 GAATACAACAAAC---------AAGTAACGGAACCTGAGAACGACACCTT    584
                     ||.||||||||||         ||||||         ||...|.|.|.||
BL05377___ans    544 GAGTACAACAAACGGGTTCCCGAAGTAA---------AGCCAGGCGCTTT    584

BSNT_03508___    585 CACAGTTGACACCTCACTATGCACAGATGTATGTCTGCTGAAGCTGCATC    634
                     .|.|.|.||.|||||..||...||.||.||.||||||.|||||||.||||
BL05377___ans    585 GAAACTCGATACCTCTTTAAATACCGACGTTTGTCTGGTGAAGCTTCATC    634

BSNT_03508___    635 CAGGCTTAAAGCCCGAAATGTTTGATGCCCTGAAAAG--CATGTACAAAG    682
                     |.||.|||||.||.||..|.||.|||...||||||.|  ||  ||.||||
BL05377___ans    635 CGGGTTTAAAACCAGAGTTTTTCGATTGTCTGAAAGGTTCA--TATAAAG    682

BSNT_03508___    683 GAATTGTCATTGAGAGTTATGGCAGCGGAGGGGTGCCGTTTGAAGGCAGA    732
                     |.|||||.||||||||.||.||.|||||.||..|.||.|||||....|||
BL05377___ans    683 GCATTGTGATTGAGAGCTACGGAAGCGGCGGCATTCCTTTTGAGAAAAGA    732

BSNT_03508___    733 GACATTTTGTCAAAAGTGAATGAGCTGATCGAAAGCGGCATTGTCGTGGT    782
                     .|||||||...|||||||||.|||||||||||...|||.||.|||||.|.
BL05377___ans    733 AACATTTTAGAAAAAGTGAACGAGCTGATCGATTCCGGTATGGTCGTAGC    782

BSNT_03508___    783 CATTACGACTCAATGTCTTGAAGAAGGCGAAGACATGAGCATTTACGAGG    832
                     .||.|||||.|||||.|||||||||||.||.||.||||||||||||||||
BL05377___ans    783 GATCACGACGCAATGCCTTGAAGAAGGAGAGGATATGAGCATTTACGAGG    832

BSNT_03508___    833 TTGGCCGCAGAGTCAACCAAGACTTAATTATCCGATCAAGAAATATGAAC    882
                     |.|||||||..||.|||||.||....||||||||.||.||||||||||||
BL05377___ans    833 TCGGCCGCAAGGTAAACCAGGATGCCATTATCCGCTCGAGAAATATGAAC    882

BSNT_03508___    883 ACAGAAGCAATTGTGCCAAAATTGATGTGGGCGCTAGGTCAGTCTTCGGA    932
                     ||.|||||.||.||.||.||..||||||||||..||||..|  ...||||
BL05377___ans    883 ACTGAAGCGATCGTTCCGAAGCTGATGTGGGCTTTAGGGAA--AAACGGA    930

BSNT_03508___    933 TCTTC---CTGTCGTCAAGAGAATTATGGAAACGCCGATAGCTGATGACG    979
                      |..|   |||..|||||.|..||.||||||||||||||.||.||.||..
BL05377___ans    931 -CAACAAGCTGAAGTCAAAAAGATCATGGAAACGCCGATTGCAGACGATA    979

BSNT_03508___    980 TTGTCCTGTAA    990
                     |..||.|.|||
BL05377___ans    980 TCATCATATAA    990


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