Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05975 and BL05383
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence dna-align/BSNT_05975.1.5803.seq
# -bsequence dna-align/BL05383.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05975-BL05383.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05975-BL05383.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05975
# 2: BL05383
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 733
# Identity: 454/733 (61.9%)
# Similarity: 454/733 (61.9%)
# Gaps: 110/733 (15.0%)
# Score: 1235.0
#
#
#=======================================
BSNT_05975 1 ATGAAATGGAATAAAA---TGCTGAAAGC-TGCGG-----GGATTGCA-- 39
||||| .||.|||| ||.|.||||| |.||| .|||..||
BL05383 1 ATGAA---CAAAAAAACAGTGTTTAAAGCGTTCGGAATGTTGATGACAGG 47
BSNT_05975 40 -GTCTTGTTTTTT--TCCGTATTAGCATATGCGGCC------CCATCTTT 80
||.||||||||| .|.||| || .||||||| ||.|||..
BL05383 48 GGTATTGTTTTTTGCGCTGTA----CA-GTGCGGCCGCACTTCCTTCTGC 92
BSNT_05975 81 AAAAGCAGTTCAAGCG--AAAACACCGACTGTCAGCACCCATACGTACAA 128
|.|.||.| |||.|| ||||.||||||.||||..|.||||||||||||
BL05383 93 ACACGCGG--CAAACGAAAAAAAACCGACGGTCACGAGCCATACGTACAA 140
BSNT_05975 129 AAAGATCAAGGAGTTAACGTATCCACAAGTGCATCACATCGGGAATGCC- 177
|||.||.||||..||.|..||.||.||||| .|||.|| |.|.|||
BL05383 141 AAACATTAAGGCTTTGAAATACCCGCAAGT--TTCAAAT---GTAAGCCC 185
BSNT_05975 178 ----GCGTTTGAAAAGAAAATCAATCAAGAGCTGAAAGCCTACATTGAAC 223
.|..|..||||.||.|||||..||||..|.|||...||.|||||.|
BL05383 186 CAAATCTCTCCAAAACAAGATCAACAAAGATTTTAAACATTATATTGAGC 235
BSNT_05975 224 AATCGTATCAGGAATATCTGAAAAACAAAAAAGCAGGCGAACAGCAGGGC 273
|.||.||..|.||.|||.|.||||||||.||||..|||.|||||||.||.
BL05383 236 AGTCCTACAAAGATTATGTAAAAAACAAGAAAGACGGCCAACAGCACGGA 285
BSNT_05975 274 TTTAAAACGGAATATCGAACATCCTTCAGCGTCAAATACAATGCGG-CAG 322
|...|||||||.||||.|||.|||||....||.|||||| ||| |.|
BL05383 286 TACCAAACGGATTATCAAACGTCCTTTGAAGTGAAATAC----CGGACCG 331
BSNT_05975 323 GC---AAGCTCAGCATTCAAACACTCAATTATATCTATTCAGGCGGCGCC 369
|| |||||.|||||.|..|||..||||||..|||||||.|||||.||.
BL05383 332 GCCAAAAGCTGAGCATCCTGACAAGCAATTACGTCTATTCCGGCGGAGCG 381
BSNT_05975 370 CACGGTTTAACGTCTGTCCAGTCCTTCAACTATGA-CTTGAAAGCAC--A 416
|||||....|||.|.||||..||.||||||||||| |||| .|.| |
BL05383 382 CACGGAAATACGGCAGTCCGCTCTTTCAACTATGACCTTG---TCTCTAA 428
BSNT_05975 417 AAAGCGGGTG-------ACGCTGGAGCAGATTCTGAGCACCAAAAC---- 455
|||.|||||| .|| |.||.||.|..||.|||.|
BL05383 429 AAAACGGGTGTATTTATCCG-------ACATCCTAAATACAAAATCGAAA 471
BSNT_05975 456 ----AAAAGTCAGCAAAACGAGAGATTACCTATATAGCTATATCAAAAAA 501
|.|||.|| ||||| .|||.|.||.|.||||||..|||||
BL05383 472 ATGGATAAGACA--AAAAC------ATACATTTACAACTATATTCAAAAA 513
BSNT_05975 502 CACGATGAGC----TGTTTTTCCCTGATGTAAAGAAAGAGGATATAACCC 547
||| ||| |.||.||.||.|||||.|||||..|.||.||...||
BL05383 514 CAC----AGCGACATTTTCTTTCCGGATGTGAAGAAGAAAGACATCGTCC 559
BSNT_05975 548 TAAACAAAGACACAATGTTTTACTTTACGGCAA--ACGGAATCGCTATCG 595
|....|||.||||....||.|| ||||...|| ||||.||.||.||||
BL05383 560 TCGGTAAAAACACGGCCTTCTA--TTACACTAACGACGGCATTGCGATCG 607
BSNT_05975 596 TCTTTGGCCAGTATGACTTGGGGCCTTATGCAG-CGGGAATCCGGGATGT 644
||||....||.||.||..|.|..||||||||.| |||.|||||||....|
BL05383 608 TCTTCCAACAATACGATGTCGCCCCTTATGCCGCCGGAAATCCGGTCGTT 657
BSNT_05975 645 GCAGGTGCCAGCCTCTA-----TTTATCAATAA 672
||||.|.|.| | |.|||||||||
BL05383 658 GCAGTTCCGA------AAACGGTGTATCAATAA 684
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