Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01701 and BL07013
See
Amino acid alignment /
Visit
BSNT_01701 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01701.1.5803.seq
# -bsequence dna-align/BL07013.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01701-BL07013.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01701-BL07013.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01701
# 2: BL07013
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 135/217 (62.2%)
# Similarity: 135/217 (62.2%)
# Gaps: 53/217 (24.4%)
# Score: 504.0
#
#
#=======================================
BSNT_01701 1 -------------------GTGG---------CTGCCGTGTTTATTTTAT 22
|.|| |..||.|.|||||||.||
BL07013 1 ATGGAGCAGAAACAGAGAGGGGGATCTCCTATCATCCTTTTTTATTTCAT 50
BSNT_01701 23 ATT-----------------------TCATAAACAGGCTCACCAATACAT 49
.|| .||||||||.|||.||.||..|.|
BL07013 51 CTTGTTTGCGGTTTTTACTGTCTTCAACATAAACAAGCTTACAAACTCTT 100
BSNT_01701 50 TATGCCTTGTCAGAGAGATTCCTGAAGAGCGGCAAGATAAGGTATTCCGA 99
||||||||||||||||||||||||||||||||||.|||||||||||..||
BL07013 101 TATGCCTTGTCAGAGAGATTCCTGAAGAGCGGCAGGATAAGGTATTTAGA 150
BSNT_01701 100 TTTATTAATGTATCT-ATATTAATTTTACTGATCTCTTCGTTTGTGGAGA 148
.|.|||||||| .|| ||.|||||||||.|||||||.||.||..|.||||
BL07013 151 ATGATTAATGT-GCTGATCTTAATTTTATTGATCTCATCATTCATTGAGA 199
BSNT_01701 149 TCTCCTTTACAGTGTAA 165
|.||||||||.||||||
BL07013 200 TTTCCTTTACGGTGTAA 216
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.