Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01707 and BL07014
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01707.1.5803.seq
# -bsequence dna-align/BL07014.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01707-BL07014.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01707-BL07014.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01707
# 2: BL07014
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 121/215 (56.3%)
# Similarity: 121/215 (56.3%)
# Gaps: 46/215 (21.4%)
# Score: 285.5
#
#
#=======================================
BSNT_01707 1 TTGTCTGTCTTTTTGATTGTATTATCCTGCATCACACTT----GC-CTTC 45
|||||||||.|..|.|||||.| |.|||.|| || ||..
BL07014 1 TTGTCTGTCATAATCATTGTTT---------TGACAATTATAAGCGCTGT 41
BSNT_01707 46 GCTT----CAGGCGCTGTTTACTATATCAAACTTCTCAGCCAGGCTGCTT 91
|.|| |.|||.|..||||.|||.|.|..||||||.|..|..||||.|
BL07014 42 GTTTACCGCCGGCTCCTTTTATTATTTAAGGCTTCTCGGATATTCTGCAT 91
BSNT_01707 92 CTTATCCGCCCAAGAGGGTTATCCGGCAGAAAGCGCTTGTTTGTTCAACC 141
||||||||||.||..|..||.|....||.|||||||||.|||| .||.
BL07014 92 CTTATCCGCCGAAACGCATTCTTAAACAAAAAGCGCTTTTTTG---CACG 138
BSNT_01707 142 GGAACCGC---CTTTACACT-ATG-TC--TTATCTTTTTCACAAAACTCC 184
||||.||| .||..|.|| .|| || ||.|.||.||||
BL07014 139 GGAAGCGCAGGGTTGGCGCTCCTGCTCCTTTTTTTTATTCA--------- 179
BSNT_01707 185 TCGCT-------TAA 192
||| |||
BL07014 180 --GCTTCTTATATAA 192
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