Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05629 and BL07066
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05629___atpE.1.5803.seq
# -bsequence dna-align/BL07066___atpE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05629___atpE-BL07066___atpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05629___atpE-BL07066___atpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05629___atpE
# 2: BL07066___atpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 182/215 (84.7%)
# Similarity: 182/215 (84.7%)
# Gaps: 4/215 ( 1.9%)
# Score: 773.0
#
#
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BSNT_05629___ 1 ATGAATTTAATAGCAGCTGCGATTGCAATTGGTTTAGGCGCACTTGGTGC 50
||||.|||||||||||||||.||.||||||||.|||||.|||||||||||
BL07066___atp 1 ATGAGTTTAATAGCAGCTGCAATCGCAATTGGATTAGGTGCACTTGGTGC 50
BSNT_05629___ 51 AGGTATTGGTAACGGTTTGATTGTTTCACGTACGGTAGAGGGGATTGCCC 100
|||||||||||||||..|.||.||.||.|||||.|||||.||.||.||.|
BL07066___atp 51 AGGTATTGGTAACGGACTTATCGTATCGCGTACAGTAGAAGGAATCGCTC 100
BSNT_05629___ 101 GTCAGCCGGAAGCAGGTAAAGAACTGAGAACTCTTATGTTCAT--GGGTA 148
|||||||.||.||.||.||||||.|||||||.||||||||||| |||||
BL07066___atp 101 GTCAGCCTGAGGCTGGAAAAGAATTGAGAACCCTTATGTTCATCGGGGTA 150
BSNT_05629___ 149 TCGCATTAGTTGAAGCCCTTCCTATTATCGCTGTCGTTATCGCATTCTTA 198
|||||.|||||.||||||||.|||||||||||.||||||||.||||||
BL07066___atp 151 --GCATTGGTTGAGGCCCTTCCGATTATCGCTGTTGTTATCGCGTTCTTA 198
BSNT_05629___ 199 GCGTTCTTTGGCTAA 213
||||||||..|||||
BL07066___atp 199 GCGTTCTTCAGCTAA 213
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