Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00198 and BL07083

See Amino acid alignment / Visit BSNT_00198 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_00198___rpmG.1.5803.seq
#    -bsequence dna-align/BL07083___rpmG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00198___rpmG-BL07083___rpmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00198___rpmG-BL07083___rpmG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00198___rpmG
# 2: BL07083___rpmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     127/151 (84.1%)
# Similarity:   127/151 (84.1%)
# Gaps:           2/151 ( 1.3%)
# Score: 527.0
# 
#
#=======================================

BSNT_00198___      1 ATG-AGAAAAAAGATTACGTTAGCATGCAAGACATGCGGAAACCGTAATT     49
                     ||| ||||||||| |.||||||||.|||||.|..||||||||.|||||||
BL07083___rpm      1 ATGAAGAAAAAAG-TAACGTTAGCCTGCAAAAATTGCGGAAATCGTAATT     49

BSNT_00198___     50 ATACGACAATGAAGAGCTCTGCATCAGCGGCTGAGCGATTAGAAGTAAAG     99
                     |||||||||||||.|||||.|||.|...||||||.||..|.|||||||||
BL07083___rpm     50 ATACGACAATGAAAAGCTCCGCAGCTTTGGCTGAACGGCTCGAAGTAAAG     99

BSNT_00198___    100 AAATACTGCAGTACTTGCAATTCACATACAGCTCATCTTGAAACAAAATA    149
                     ||||||||||.||..||||||||||||||||..|||||.|||||||||||
BL07083___rpm    100 AAATACTGCAATAACTGCAATTCACATACAGTACATCTGGAAACAAAATA    149

BSNT_00198___    150 G    150
                     |
BL07083___rpm    150 G    150


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