Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00070 and BPUM_0020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence dna-align/BSNT_00070___yabC.1.24716.seq
# -bsequence dna-align/BPUM_0020___yabC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00070___yabC-BPUM_0020___yabC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00070___yabC-BPUM_0020___yabC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: BPUM_0020___yabC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity: 648/903 (71.8%)
# Similarity: 648/903 (71.8%)
# Gaps: 48/903 ( 5.3%)
# Score: 2198.0
#
#
#=======================================
BSNT_00070___ 1 ATGTTAAGGCGC-CAAATGAGCTTTAATGGAAAGTCGGACATGGGAATTC 49
||| || |.| ||||..||||||.||||..|.||.||.|||||.||||
BPUM_0020___y 1 ATG--AA--CACACAAAAAAGCTTTGATGGTCAATCAGATATGGGGATTC 46
BSNT_00070___ 50 TTTACTTGGTCCCAACCCCAATCGGAAATCTAGAGGACATGACATTCCGG 99
|.||..|.||||||||||||||.||.|||.||||.||.|||||.||.||.
BPUM_0020___y 47 TATATCTCGTCCCAACCCCAATTGGCAATTTAGAAGATATGACGTTTCGA 96
BSNT_00070___ 100 GCGATCGACACGCTGAAATCAGTAGATGCGATTGCTGCGGAAGATACGAG 149
||.||..|.||..|.|||...|||||....|||||.||.||.|||||.||
BPUM_0020___y 97 GCCATACAAACATTAAAAGATGTAGACTATATTGCCGCAGAGGATACAAG 146
BSNT_00070___ 150 GCAAACGAAAAAGCTTTGTCATGTATATGAAATTGAAACACCGCT--CGT 197
.|||||||||||||||||.|||||.|||||||||||.||.||..| ||
BPUM_0020___y 147 ACAAACGAAAAAGCTTTGCCATGTCTATGAAATTGATACGCCATTGACG- 195
BSNT_00070___ 198 CAGCTATCACGAACACAATAAAGAAAGCAGTGGGCACAAAATTATTGAAT 247
||.|||||.||.||.||.|||||.||.||.||.|||||..|.||.||||
BPUM_0020___y 196 -AGTTATCATGAGCATAACAAAGACAGTAGCGGTCACAAGTTGATCGAAT 244
BSNT_00070___ 248 GGCTGAAATCGGGAAAAAACATTGCTCTTGTCAGTGATGCCGGTCTGCCG 297
||.|.|||...|||||||||||.||.|||||.||.|||||.|||.|.|||
BPUM_0020___y 245 GGTTAAAAGAAGGAAAAAACATCGCACTTGTGAGCGATGCTGGTTTACCG 294
BSNT_00070___ 298 ACGATTTCTGATCCCGGAGCCGAAATTGTAAAAGATTTTACGGATATAGG 347
||||||||||||||.||.||.|||.|.||...|||.|||||..||||.||
BPUM_0020___y 295 ACGATTTCTGATCCAGGTGCTGAAGTGGTCCGAGACTTTACTAATATCGG 344
BSNT_00070___ 348 CGGTTATGTTGTTCCGTTGCCGGGAGCAAATGCTGCATTAACAGCTCTTA 397
|||||||||.|||||.||.||.|||||||||||||||.|.|||||.||.|
BPUM_0020___y 345 CGGTTATGTCGTTCCATTACCTGGAGCAAATGCTGCACTTACAGCACTCA 394
BSNT_00070___ 398 TTGCTTCAGGTATTGTACCGCAGCCTTTTTTCTTTTACGGTTTTCTCAAC 447
||||.|||||.|||...||||||||.|||||||||||.||.||||||.||
BPUM_0020___y 395 TTGCATCAGGGATTACGCCGCAGCCATTTTTCTTTTATGGATTTCTCGAC 444
BSNT_00070___ 448 AGACAGAAAAAAGAAAAGAAGAAGGAGCTTGAAGCCCTTAAAAAACGGCA 497
.||||.|||||.||||||||.||..||||.|||||..|.||.||.||.||
BPUM_0020___y 445 CGACAAAAAAAGGAAAAGAAAAAACAGCTCGAAGCTTTGAAGAAGCGTCA 494
BSNT_00070___ 498 GGAAACGATCATTTTTTATGAAGCGCCTCACAGATTGAAGGAAACCTTGT 547
.|||||.||||||||.||||||||||||||..|.||.||.|||||..||.
BPUM_0020___y 495 AGAAACCATCATTTTCTATGAAGCGCCTCATCGGTTAAAAGAAACGCTGA 544
BSNT_00070___ 548 CAGCGATGGCAGAGATATTAGGAGATCGGGAAATCGCTGTAACGCGTGAA 597
|...||||..|||..|.|..||..|.|||.|.|||||..|.|||.|.|||
BPUM_0020___y 545 CTTTGATGAAAGAAGTGTGGGGTAACCGGAATATCGCCATTACGAGAGAA 594
BSNT_00070___ 598 CTCACTAAGAAATATGAAGAGTTTATCCGAGGAACGATATCCGAG-GTCA 646
||.||.||.||||.||||||||||||.||.||| |||.| || |||.
BPUM_0020___y 595 CTAACGAAAAAATTTGAAGAGTTTATTCGTGGA--GATTT---AGAGTCT 639
BSNT_00070___ 647 TTG----GATGGGCAAACGAGGATCAGATACGCGGCGAGTTTTGTCTTGT 692
.|| .||||||.|..||..||||.||.||.||.||.||.||||||||
BPUM_0020___y 640 GTGCTGACATGGGCGACAGAAAATCAAATCCGAGGTGAATTCTGTCTTGT 689
BSNT_00070___ 693 TGTAGAAGG--------AAGTAATAATGAAGAGGTAGATGAGGAAGAACA 734
.|||.|||| ||| ||.|.||||||.||.|| ||||||..
BPUM_0020___y 690 CGTACAAGGGAACGATCAAG--ATGAAGAAGAGCTAAAT---GAAGAAGT 734
BSNT_00070___ 735 ATGGTGGGAAACCCTCA-CTGCGAAAGAACATGTCGA-GCATTACATCTC 782
.|||| ||||..|||.| |.|..||||||||.|| || .||||||| |.
BPUM_0020___y 735 TTGGT-GGAAGTCCTTATCAGAAAAAGAACACGT-GATCCATTACA--TA 780
BSNT_00070___ 783 GA--AAGGCGCTACTTCTAAAGAAGCCATTAAAAAAG----CAGCAGTCG 826
|| ||||....||.||.||.||||||||| ||| ||||.||||
BPUM_0020___y 781 GAAGAAGGATTAACGTCAAAGGAAGCCATT----AAGCGTACAGCCGTCG 826
BSNT_00070___ 827 ATCGCAATGTACCAAAGCGTGAAGTGTACGATGCTTACCATATTAAGCAA 876
|.||....||||||||.||.....|.|||||||||||.||||||.|.|||
BPUM_0020___y 827 AACGTGGAGTACCAAAACGCACCATATACGATGCTTATCATATTGAACAA 876
BSNT_00070___ 877 TAA 879
|||
BPUM_0020___y 877 TAA 879
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