Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00080 and BPUM_0028

See Amino acid alignment / Visit BSNT_00080 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence dna-align/BSNT_00080___veg.1.24716.seq
#    -bsequence dna-align/BPUM_0028___veg.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00080___veg-BPUM_0028___veg.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00080___veg-BPUM_0028___veg.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00080___veg
# 2: BPUM_0028___veg
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     221/261 (84.7%)
# Similarity:   221/261 (84.7%)
# Gaps:           3/261 ( 1.1%)
# Score: 946.0
# 
#
#=======================================

BSNT_00080___      1 ATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGG     50
                     |||||||||||.||||||||.||.|||||||||||||||||.||.|||||
BPUM_0028___v      1 ATGGCGAAGACTTTGTCCGACATCAAAAGATCGCTTGATGGTAACTTAGG     50

BSNT_00080___     51 TAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGC    100
                     ||||.|..||||||||||.||.|||||.||||||||.|||||.|||||||
BPUM_0028___v     51 TAAACGTTTGACGTTAAAGGCTAACGGGGGCCGCCGTAAAACAATTGAGC    100

BSNT_00080___    101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA    150
                     |||||||||||||||||||.||||||||||||||.||||||||.|||.||
BPUM_0028___v    101 GTTCGGGCATTTTAGCTGAAACGTACCCTTCTGTATTTGTGATTCAATTA    150

BSNT_00080___    151 GATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT    200
                     ||||||||.|||||.|||||||||||||||||.||.||||||||.|||||
BPUM_0028___v    151 GATCAAGATGAGAATTCGTTTGAAAGAGTTTCTTATAGTTATGCAGATAT    200

BSNT_00080___    201 TTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAG    250
                     ..||||||||||.||.||..|.||.||   .|||||..||||.|||||||
BPUM_0028___v    201 ACTGACTGAGACGGTCGAATTAACGTT---CGATGATACCGCTAGCTCAG    247

BSNT_00080___    251 TGGCATTTTAA    261
                     |.||.|.||||
BPUM_0028___v    248 TCGCCTATTAA    258


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