Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00182 and BPUM_0073

See Amino acid alignment / Visit BSNT_00182 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:06
# Commandline: needle
#    -asequence dna-align/BSNT_00182___yacK.1.24716.seq
#    -bsequence dna-align/BPUM_0073___disA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00182___yacK-BPUM_0073___disA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00182___yacK-BPUM_0073___disA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00182___yacK
# 2: BPUM_0073___disA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity:     832/1099 (75.7%)
# Similarity:   832/1099 (75.7%)
# Gaps:          35/1099 ( 3.2%)
# Score: 3091.0
# 
#
#=======================================

BSNT_00182___      1 ATGGAAAAAGAGAAAAAAGGGGCGA---AACACGA---GTTAGACCTGTC     44
                     ||||||||||||||||||||.||||   |||.|||   .|||||      
BPUM_0073___d      1 ATGGAAAAAGAGAAAAAAGGAGCGAGAGAACTCGATCTCTTAGA------     44

BSNT_00182___     45 ATCTATATTGCAGTTTGTTGCTCCGGGTACACCGCTCAGAGCGGGGATGG     94
                        |||..|.||||||||.||.||.||.|||||.||..|.||.|||||.|
BPUM_0073___d     45 ---TATCGTACAGTTTGTGGCACCAGGGACACCTCTTCGGGCTGGGATCG     91

BSNT_00182___     95 AAAACGTCTTGAGAGCAAATACAGGCGGTCTGATTGTTGTTGGATATAAT    144
                     ||||||||.||||.||.|||||.|||||.||.|||||||||||.|||||.
BPUM_0073___d     92 AAAACGTCCTGAGGGCCAATACTGGCGGGCTAATTGTTGTTGGTTATAAC    141

BSNT_00182___    145 GATAAAGTAAAAGAAGTG--GTGGACGGCGGCTTTCACATAAACACGGCT    192
                     ||.|||||.||  .||||  ||.||.||.||.||||||||.||..|.||.
BPUM_0073___d    142 GACAAAGTGAA--GAGTGTTGTCGATGGAGGATTTCACATTAATTCTGCC    189

BSNT_00182___    193 TTTTCTCCGGCGCATTTATATGAGTTGGCTAAAATGGATGGAGCGATCAT    242
                     ||.||.||.||.||.||||||||.|||||.||.|||||||||||.|||||
BPUM_0073___d    190 TTCTCCCCAGCACACTTATATGAATTGGCGAAGATGGATGGAGCCATCAT    239

BSNT_00182___    243 TTTAAGTGATTCGGGTCAAAAGATCCTCTACGCGAATACTCAGCTGATGC    292
                     ||||||.|||||.||||||||||||.|.||.||||||||.|||||.||||
BPUM_0073___d    240 TTTAAGCGATTCTGGTCAAAAGATCTTGTATGCGAATACACAGCTTATGC    289

BSNT_00182___    293 CGGATGCCACAATTTCTTCATCAGAAACAGGAATGCGGCACAGAACTGCC    342
                     |.|||||.||.||...||||||.|||||.||.|||.|||||.|.|||||.
BPUM_0073___d    290 CAGATGCGACCATCCATTCATCGGAAACGGGCATGAGGCACCGTACTGCT    339

BSNT_00182___    343 GAAAGAGTAGCTAAGCAAACTGGCTGTCTTGTAATCGCTATTTCTGAAAG    392
                     |||.|.|||||.|||||.|||||||||.|..|.||.||.|||||||||.|
BPUM_0073___d    340 GAACGTGTAGCGAAGCAGACTGGCTGTTTAATCATTGCAATTTCTGAACG    389

BSNT_00182___    393 AAGAAATGTCATAACGTTATATC-AGGAAAACATGAAGTATACA--CTAA    439
                     .||.||.|||||.||.|||||.| ||||||.|  |..|| ||||  ||.|
BPUM_0073___d    390 GAGGAACGTCATTACCTTATACCAAGGAAATC--GTCGT-TACACGCTGA    436

BSNT_00182___    440 AAGACATAGGATTTATTTTAACCAAGGCGAACCAAGCCATTCAAACACTT    489
                     ||||.||.||.|||||||||||.|||||.|||||||||||.|||||||||
BPUM_0073___d    437 AAGATATTGGCTTTATTTTAACGAAGGCTAACCAAGCCATACAAACACTT    486

BSNT_00182___    490 GAAAAGTATAAGACAATCCTCGATAAAACGATTAATGCACTGAACGCGTT    539
                     ||.||.|||||.||.||..|.|||.|..|.|||..|||..|.|.|||..|
BPUM_0073___d    487 GAGAAATATAAAACCATTTTAGATCACGCCATTTCTGCGTTAAGCGCCCT    536

BSNT_00182___    540 AGAGTTTGAGGAACTTGTTACCTTCAGTGATGTCTTGTCTGTCATGCATC    589
                     .||.|||||.||.|||||.|||||..|||||||.||.||.||..||||||
BPUM_0073___d    537 GGAATTTGAAGAGCTTGTGACCTTTGGTGATGTATTATCCGTGCTGCATC    586

BSNT_00182___    590 GTTATGAAATGGTACTGAGAATCAAAAACGAAATTAATATGTATATCAAA    639
                     ||||.||.|||||.||.|||||||||||.|||||.|||||||||||||||
BPUM_0073___d    587 GTTACGAGATGGTGCTTAGAATCAAAAATGAAATCAATATGTATATCAAA    636

BSNT_00182___    640 GAGCTGGGGACAGAAGGGCATCTGATCAAACTGCAAGTCATTGAATTGAT    689
                     |||||.||.||.|||||.|||.|||||...||||||||||.||||.||||
BPUM_0073___d    637 GAGCTTGGAACTGAAGGACATTTGATCCGTCTGCAAGTCAATGAACTGAT    686

BSNT_00182___    690 TACGGATATGGAAGAAGAGGCCGCTTTATTTATTAAGGACTATGTAAAAG    739
                     |||.||||||||..|.||.||.||||||||||||||.||.||.||.||||
BPUM_0073___d    687 TACAGATATGGAGCAGGAAGCGGCTTTATTTATTAAAGATTACGTGAAAG    736

BSNT_00182___    740 AAAAGATTAAAGATCCGTTTGTCCT-CTTGAAGGAGCTGCAGGATATGTC    788
                     ||||||||||||||||.|.|||.|| ||| ||..||||.||.||||||||
BPUM_0073___d    737 AAAAGATTAAAGATCCATATGTTCTGCTT-AAACAGCTCCAAGATATGTC    785

BSNT_00182___    789 CAGTTATGATCTGCTGGATGATTCCATTGTGTATAAGCTTCTCGGTTACC    838
                     .||.|.|||.||..|.||||||||||||.||||.|||.|.||.||.||.|
BPUM_0073___d    786 TAGCTTTGAGCTTTTAGATGATTCCATTCTGTACAAGTTACTAGGCTATC    835

BSNT_00182___    839 CTGCTTCTACTAATCTTGATGATTATGTATTGCCGAGAGGATACAGGCTG    888
                     |.||||||||.|||.||||.||.|||||.|...|.|||||.|||||..||
BPUM_0073___d    836 CAGCTTCTACAAATATTGACGAATATGTGTACACAAGAGGTTACAGATTG    885

BSNT_00182___    889 TTAAATAAGATACCGCGTCTTCCGATGCCGATTGTTGAAAATGTTGTAGA    938
                     .|..|.||.||.||..|.||.||.|||||.||.||.|||||.||.||.||
BPUM_0073___d    886 CTTCACAAAATCCCTAGACTGCCTATGCCAATCGTCGAAAACGTGGTTGA    935

BSNT_00182___    939 AGCATTTGGAGTCCTGCCAA----GGATTATTGAGGCGAGTGCAGAAGAA    984
                     ||||||.||.||..|    |    |.|||||.||.|||..||.|.||||.
BPUM_0073___d    936 AGCATTCGGTGTGTT----AGATCGAATTATGGAAGCGGATGTACAAGAT    981

BSNT_00182___    985 TTAGATGAAGTAGAGGGAATCGGTGAAGTACGAGCCCAAAAAATCAAAAA   1034
                     ||.|||||||||||.|||||.||.||||||.||||..||||.||.|||||
BPUM_0073___d    982 TTGGATGAAGTAGAAGGAATTGGAGAAGTAAGAGCGAAAAAGATAAAAAA   1031

BSNT_00182___   1035 AGGATTAAAACGCCTGCAAGAGAAGCATTATTTAGACAGACAACTGTGA   1083
                     ||||||||||.|..|||||||.||.||||||.|.||..||||.||||.|
BPUM_0073___d   1032 AGGATTAAAAAGGTTGCAAGAAAAACATTATATCGATCGACAGCTGTAA   1080


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