Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00199 and BPUM_0085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00199___secE.1.24716.seq
# -bsequence dna-align/BPUM_0085___secE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00199___secE-BPUM_0085___secE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00199___secE-BPUM_0085___secE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00199___secE
# 2: BPUM_0085___secE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 135/185 (73.0%)
# Similarity: 135/185 (73.0%)
# Gaps: 13/185 ( 7.0%)
# Score: 463.5
#
#
#=======================================
BSNT_00199___ 1 ATGCGTATTATGAAATTCTTTAAAGATGTTGGGAAAGAAATGAAAAAGGT 50
|||||||||||.|..|||||.|||..|||.||.|||||||||||.|||||
BPUM_0085___s 1 ATGCGTATTATCAGTTTCTTAAAAAGTGTCGGAAAAGAAATGAAGAAGGT 50
BSNT_00199___ 51 AAGCTGGCCTAAAGGAAAA-GAGTTAACGCGTTATACCATTACGGTAATT 99
.|||||||| ||||.|||| ||..|.|..|||||.||.||.||.||.|||
BPUM_0085___s 51 CAGCTGGCC-AAAGAAAAACGAAATGATTCGTTACACAATCACTGTTATT 99
BSNT_00199___ 100 TCAACAGTTATCTTTTTTGTTATCTTTTTTGCCCTC----CTTGACACAG 145
|.||||||..|.||.||||..|||||||| ||| |||||.|.||
BPUM_0085___s 100 TTAACAGTCGTATTCTTTGCAATCTTTTT----CTCTTTTCTTGATATAG 145
BSNT_00199___ 146 GAATTTCTCAATTAATTCGTTTTATAGTTGAATAA 180
||||.||.||||||| |||..| ||.||.|.|||
BPUM_0085___s 146 GAATCTCACAATTAA-TCGAAT--TAATTCATTAA 177
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