Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00211 and BPUM_0095

See Amino acid alignment / Visit BSNT_00211 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:09
# Commandline: needle
#    -asequence dna-align/BSNT_00211___ybxF.1.24716.seq
#    -bsequence dna-align/BPUM_0095___ybxF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00211___ybxF-BPUM_0095___ybxF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00211___ybxF-BPUM_0095___ybxF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00211___ybxF
# 2: BPUM_0095___ybxF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     200/251 (79.7%)
# Similarity:   200/251 (79.7%)
# Gaps:           4/251 ( 1.6%)
# Score: 791.0
# 
#
#=======================================

BSNT_00211___      1 ATGTCTTATGATAAAGTATCACAGGCCAAATCAATTATTATTGGTACGAA     50
                     ||||||||||||||||||||||||||..||||.|||||||||||||||||
BPUM_0095___y      1 ATGTCTTATGATAAAGTATCACAGGCTCAATCCATTATTATTGGTACGAA     50

BSNT_00211___     51 GCAAACAGTGAAAGCTCTAAAGCGAGGTTCAGTAAAGGAAGTAGTCGTTG    100
                     |||||||||.||||||||.||.||||.|||||||||||||.|.|||||.|
BPUM_0095___y     51 GCAAACAGTAAAAGCTCTGAAACGAGATTCAGTAAAGGAAATCGTCGTAG    100

BSNT_00211___    101 CAAAAGACGCAGATCCGATAC--TCACGTCAAGTGTTGTTTCACTTGCTG    148
                     |.|||||.||.|||||  |.|  |.||..|.|||||......|||.||..
BPUM_0095___y    101 CGAAAGATGCTGATCC--TGCTTTAACAGCTAGTGTAACAAAACTAGCGC    148

BSNT_00211___    149 AAGATCAAGGTATCTCTGTCTCAATGGTTGAATCCATGAAAAAGCTCGGC    198
                     ||||..|.|||.|.....|.|.|.||||.||.||||||||||||||||||
BPUM_0095___y    149 AAGAGAAGGGTGTAGACATTTTAGTGGTAGATTCCATGAAAAAGCTCGGC    198

BSNT_00211___    199 AAAGCCTGCGGAATTGAGGTAGGAGCAGCCGCTGTTGCCATTATTTTATA    248
                     |||||||||||||||||.||.||.|||||.||||||||||||||.|||||
BPUM_0095___y    199 AAAGCCTGCGGAATTGAAGTTGGGGCAGCAGCTGTTGCCATTATGTTATA    248

BSNT_00211___    249 A    249
                     .
BPUM_0095___y    249 G    249


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