Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00227 and BPUM_0109
See
Amino acid alignment /
Visit
BSNT_00227 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00227___rplP.1.24716.seq
# -bsequence dna-align/BPUM_0109___rplP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00227___rplP-BPUM_0109___rplP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00227___rplP-BPUM_0109___rplP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00227___rplP
# 2: BPUM_0109___rplP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 402/435 (92.4%)
# Similarity: 402/435 (92.4%)
# Gaps: 0/435 ( 0.0%)
# Score: 1878.0
#
#
#=======================================
BSNT_00227___ 1 ATGTTATTACCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT 50
||||||||.|||||||||||.||.|||||||||||.|||||.||||||||
BPUM_0109___r 1 ATGTTATTGCCAAAACGCGTGAAGTATCGCAGAGAACATCGTGGAAAAAT 50
BSNT_00227___ 51 GCGTGGCCGTGCGAAAGGCGGTACTGAAGTACATTTTGGAGAATTCGGTA 100
||||||.|||||.|||||.|||||||||||||||||.||.||.|.|||||
BPUM_0109___r 51 GCGTGGTCGTGCAAAAGGTGGTACTGAAGTACATTTCGGTGAGTACGGTA 100
BSNT_00227___ 101 TCCAAGCTCTTGAAGCTTCTTGGATTACTAACCGTCAAATCGAAGCTGCA 150
||||||||||.||||||||.||||||||.||||||||||||||||||||.
BPUM_0109___r 101 TCCAAGCTCTAGAAGCTTCATGGATTACAAACCGTCAAATCGAAGCTGCT 150
BSNT_00227___ 151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA 200
||||||||.||||||||||||||||||||||||||||||||||||||.||
BPUM_0109___r 151 CGTATTGCTATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATTAA 200
BSNT_00227___ 201 AATTTTCCCTTCTAAACCTTACACTGCTAAACCACTTGAGGTACGTATGG 250
|||||||||||||||.||.|||||.||.|||||.||.|||||.||.||||
BPUM_0109___r 201 AATTTTCCCTTCTAAGCCATACACAGCAAAACCTCTAGAGGTCCGCATGG 250
BSNT_00227___ 251 GATCCGGTAAAGGGGCTCCAGAAGGTTGGGTAGCTGTTGTAAAACCGGGC 300
|.|||||||||||.|||||||||||.|||||||||||.||||||||||||
BPUM_0109___r 251 GTTCCGGTAAAGGTGCTCCAGAAGGATGGGTAGCTGTAGTAAAACCGGGC 300
BSNT_00227___ 301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAGGTTGCTCGTGAAGC 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BPUM_0109___r 301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAAGTTGCTCGTGAAGC 350
BSNT_00227___ 351 GCTTCGCCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC 400
.|||||.|||||||||||||||||||||||||||||||||||||||||||
BPUM_0109___r 351 TCTTCGTCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC 400
BSNT_00227___ 401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA 435
|||||||||||||||||||||||||||||||||||
BPUM_0109___r 401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA 435
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.