Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00242 and BPUM_0124
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00242___map.1.24716.seq
# -bsequence dna-align/BPUM_0124___map.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00242___map-BPUM_0124___map.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00242___map-BPUM_0124___map.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00242___map
# 2: BPUM_0124___map
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity: 634/750 (84.5%)
# Similarity: 634/750 (84.5%)
# Gaps: 6/750 ( 0.8%)
# Score: 2670.0
#
#
#=======================================
BSNT_00242___ 1 ATGATTATCTGTAAAACCCCACGTGAACTTGGTATCATGCGGGAAGCAGG 50
|||||||||||||||||.||.||.||.||||..||.|||.|.|||||.||
BPUM_0124___m 1 ATGATTATCTGTAAAACTCCTCGCGAGCTTGAGATTATGAGAGAAGCTGG 50
BSNT_00242___ 51 GCGAATCGTGGCTTTAACTCATGAAGAGTTAAAAAAGCACATTAAACCAG 100
.||.||.||.||..|.|||||||||.||.|.||.||.||.||.|||||||
BPUM_0124___m 51 ACGCATTGTCGCACTGACTCATGAAAAGCTGAAGAAACATATAAAACCAG 100
BSNT_00242___ 101 GAATCTCGACAAAAGAATTGGATCAAATTGCCGAACGTTTTATTAAGAAG 150
|.||.||||||||||||||||||||||||||||||||||||||||..|||
BPUM_0124___m 101 GTATTTCGACAAAAGAATTGGATCAAATTGCCGAACGTTTTATTACAAAG 150
BSNT_00242___ 151 CAGGGTGCAATCCCATCTTTTAAGGGGTATAATGGGTTTCGCGGGAGCAT 200
|||||||||||||||||||||||.|||||||||||.||||||||||||||
BPUM_0124___m 151 CAGGGTGCAATCCCATCTTTTAAAGGGTATAATGGTTTTCGCGGGAGCAT 200
BSNT_00242___ 201 TTGCGTATCAGTTAATGAAGAACTCGTTCACGGCATACCTGGCAGCAGGG 250
||||||.||.||.||||||||||||||||||||.||.|||||.|...|||
BPUM_0124___m 201 TTGCGTTTCGGTGAATGAAGAACTCGTTCACGGTATTCCTGGTAAACGGG 250
BSNT_00242___ 251 TGCTGAAG-GACGGTGACATCATCAGTATTGATATCGGTGCTAAATTAAA 299
| .|.|.| ||.|||||||||||.|||||.|||||.||.||.||.|||||
BPUM_0124___m 251 T-TTTACGTGATGGTGACATCATTAGTATCGATATTGGCGCAAAGTTAAA 299
BSNT_00242___ 300 TGGTTATCATGGTGACTCTGCATGGACATATCCGGTAGGAAACATCAGCG 349
|||.|||||||||||||||||.|||||.|||||.||.||....|||||.|
BPUM_0124___m 300 TGGCTATCATGGTGACTCTGCTTGGACTTATCCAGTTGGGGTAATCAGTG 349
BSNT_00242___ 350 ATGATGACAAAAAACTTCTGGAAGTGACAGAGGAGTCTTTATATAAAGGC 399
||||.|||...|||||.||||||||.||||||||.|||.|||||||||||
BPUM_0124___m 350 ATGAAGACCGCAAACTACTGGAAGTCACAGAGGAATCTCTATATAAAGGC 399
BSNT_00242___ 400 TTGCAGGAAGCAAAACCAGGTGAACGTTTGTCGAATATTTCCCACGCAAT 449
||.|||||||||||.|||||.||||||.|||||||.||||||||.||.||
BPUM_0124___m 400 TTACAGGAAGCAAAGCCAGGCGAACGTCTGTCGAACATTTCCCATGCTAT 449
BSNT_00242___ 450 ACAAACGTATGTCGAAAATGAGCAGTTTTCAGTTGTTAGGGAGTATGTCG 499
||||||||||||.|||||.|||.|.||.|||||||||||.||.|||||.|
BPUM_0124___m 450 ACAAACGTATGTAGAAAACGAGAATTTCTCAGTTGTTAGAGAATATGTTG 499
BSNT_00242___ 500 GACATGGTGTTGGTCAAGA-CTTGCATGAGGACCCGCAAATTCCTCATTA 548
|||||||.||.||.||.|| ||| |||||||||||.||||||||||||||
BPUM_0124___m 500 GACATGGGGTCGGACAGGATCTT-CATGAGGACCCTCAAATTCCTCATTA 548
BSNT_00242___ 549 CGGTCCGCCCAACAAAGGACCACGGCTTAAACCTGGCATGGTTCTCGCTA 598
.||||||||.||||||||.||.|||||.||||||||.|||||..|.||.|
BPUM_0124___m 549 TGGTCCGCCTAACAAAGGCCCGCGGCTAAAACCTGGAATGGTGTTGGCCA 598
BSNT_00242___ 599 TTGAACCTATGGTGAACGCTGGCAGCCGCTACGTGAAAACATTGGCTGAT 648
|.|||||.|||||||||||.||||||||.||.||||||||||||||||||
BPUM_0124___m 599 TCGAACCGATGGTGAACGCAGGCAGCCGATATGTGAAAACATTGGCTGAT 648
BSNT_00242___ 649 AACTGGACGGTTGTAACGGTAGATGGGAAAAAGTGTGCTCATTTTGAACA 698
||||||||||||||||||||.||||||||||||||||||||.|||||.||
BPUM_0124___m 649 AACTGGACGGTTGTAACGGTTGATGGGAAAAAGTGTGCTCACTTTGAGCA 698
BSNT_00242___ 699 TACGATTGCGATTACGGAAACGGGTTTTGATATACTGACGAGAG-TCTAG 747
|||||||||||||||.||.||.|||||||||||||||||.| || |.|||
BPUM_0124___m 699 TACGATTGCGATTACAGATACAGGTTTTGATATACTGACTA-AGATTTAG 747
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