Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00266 and BPUM_0148

See Amino acid alignment / Visit BSNT_00266 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:13
# Commandline: needle
#    -asequence dna-align/BSNT_00266___ybaN.1.24716.seq
#    -bsequence dna-align/BPUM_0148___ybaN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00266___ybaN-BPUM_0148___ybaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00266___ybaN-BPUM_0148___ybaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00266___ybaN
# 2: BPUM_0148___ybaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity:     526/806 (65.3%)
# Similarity:   526/806 (65.3%)
# Gaps:          82/806 (10.2%)
# Score: 1597.5
# 
#
#=======================================

BSNT_00266___      1 GTGAATCACTTCTATGTGTGGCACATTAAACGGGTGAAACAATTAATTAT     50
                     .|||.||..||.|||||||.||..|||||||||.||||.|||.|..|.||
BPUM_0148___y      1 TTGAGTCGATTATATGTGTTGCCTATTAAACGGCTGAAGCAAGTTGTCAT     50

BSNT_00266___     51 TATACTTATCGCCGCATTTGCAGCTGCCAGCTTTTTTTATATCCAAA--G     98
                     |||.|||.|.||.||..||||||||||.|.||||||||||.|.||||  |
BPUM_0148___y     51 TATTCTTGTAGCAGCCCTTGCAGCTGCAACCTTTTTTTATGTACAAAAGG    100

BSNT_00266___     99 AGCTGTCCCGCTTCCCGTGTTTTCAACTGACAC-CGGACCTAAAGCCATT    147
                     .||.|  |||||..|.||.|||..|||.|| || ||||||...|||.|||
BPUM_0148___y    101 CGCCG--CCGCTGTCGGTATTTAAAACAGA-ACACGGACCCCGAGCTATT    147

BSNT_00266___    148 TATAAAGGAGAAACAGATTCTAAAGATATTTCACTTACTTTCGATATCAG    197
                     ||||||||.||.||....||.|||.||.|.||.||.|||||..|||||.|
BPUM_0148___y    148 TATAAAGGCGAGACTTCCTCAAAACATGTCTCCCTCACTTTTAATATCGG    197

BSNT_00266___    198 CTGGGGCGATGAGAGAGCAGAACCGATACTTAA---TACTCTGAAAGCAA    244
                     ||||||.|||||||..||.|..||.|| .||||   |.||..||.||  .
BPUM_0148___y    198 CTGGGGAGATGAGAAGGCTGTGCCTAT-TTTAAATGTCCTTCGAGAG--T    244

BSNT_00266___    245 ACGGGATTAAAAATGCAACGTTTTTTCTTTCAGCTTCTTGGGCAGAACGC    294
                     |||..||.||.||.||.||.||||||||.||.|||||||||||.||.||.
BPUM_0148___y    245 ACGATATAAAGAACGCTACTTTTTTTCTGTCTGCTTCTTGGGCTGAGCGT    294

BSNT_00266___    295 CATCCCGACACAGTGGCCCGTATCGT------------AAAGGACGGCCA    332
                     |||||.||            ||||||            |.||||||||||
BPUM_0148___y    295 CATCCGGA------------TATCGTCAAACAAATTAGAGAGGACGGCCA    332

BSNT_00266___    333 TCAAATCGGGAGCATGGGCTACGCTTATAAAAACTAT-GCCAATTTAGAG    381
                     .|||||.||.|||.|.|||||.|||||||||||.||| ||||..||..||
BPUM_0148___y    333 CCAAATTGGCAGCCTTGGCTATGCTTATAAAAATTATAGCCAGCTTGAAG    382

BSNT_00266___    382 AGCAGCGAAAT-AAAAAAGGACATGAACCGTGCGCAAACAGCCTTTGAAA    430
                     | .||.||||| ||..|||..|.|| .|||.||.||||...|.|||.|||
BPUM_0148___y    383 A-TAGTGAAATCAAGCAAGATCTTG-TCCGGGCACAAAATTCATTTCAAA    430

BSNT_00266___    431 AGTTAGGGGTCAAAGACATACAGCTATTAAGACCCCCTACCGGCCAATT-    479
                     ||.|.||..|..|.|||||.||.|||||||||||.||.||.||.||||| 
BPUM_0148___y    431 AGCTTGGACTAGATGACATTCAACTATTAAGACCGCCAACTGGGCAATTT    480

BSNT_00266___    480 ---CAATAAGAATGTTCTAAAGGTCGCAAAGCAATACAATTATACAGTCG    526
                        .||.|||.||    ||||..|.||.|..||.|||..||||||.||.|
BPUM_0148___y    481 AACGAAAAAGCAT----TAAAAATTGCCACACAGTACGGTTATACCGTTG    526

BSNT_00266___    527 TTCATTACAGTGTGAACTCTCAAGACTGGACAAATCCCGGAGTTG-----    571
                     |.||||||||.||.||.||.||.||.|||...|||||.||.||.|     
BPUM_0148___y    527 TCCATTACAGCGTCAATTCACAGGATTGGCTGAATCCAGGCGTCGATCAG    576

BSNT_00266___    572 --------AAA---AAATCATCGACAATGTGACCAAGCAAGTTTCCGGTG    610
                             |||   ||||.|||||    .|||..||            .|
BPUM_0148___y    577 ATTGTTCAAAATGTAAATGATCGA----ATGAAAAA------------CG    610

BSNT_00266___    611 GAGACATTATTCTTTTACATGCCTCCGATTCGGCAAAACAAACAGAAGAA    660
                     ||||||||.||||..||||||||||.|||||.||||..|||||.|...||
BPUM_0148___y    611 GAGACATTGTTCTCCTACATGCCTCAGATTCAGCAACCCAAACCGCTCAA    660

BSNT_00266___    661 GCATTGCCTGATATCATCCATCAGCTGAAAGA-AAAAGGATTAAAAAATG    709
                     ||.||.||.|.|||..|..|.||..|.||||| ||||...|| |||||.|
BPUM_0148___y    661 GCCTTACCAGCTATTTTGAAACAAATCAAAGAGAAAAACCTT-AAAAACG    709

BSNT_00266___    710 TAACCGTGGGTGACCTCATCGCAAATTCTGATGCCAAATCCGCAGAGGTA    759
                     |.||.||.||.||.||.|||.|.|||.|..|..|.|.|||..|.||.||.
BPUM_0148___y    710 TGACGGTTGGCGAACTGATCTCCAATACCAAAACTAGATCATCTGAAGTT    759

BSNT_00266___    760 AAGTAA    765
                     |||||.
BPUM_0148___y    760 AAGTAG    765


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00266 and BPUM_0148

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
