Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00343 and BPUM_0161

See Amino acid alignment / Visit BSNT_00343 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence dna-align/BSNT_00343___ybbM.1.24716.seq
#    -bsequence dna-align/BPUM_0161___ybbM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00343___ybbM-BPUM_0161___ybbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00343___ybbM-BPUM_0161___ybbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00343___ybbM
# 2: BPUM_0161___ybbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity:     457/643 (71.1%)
# Similarity:   457/643 (71.1%)
# Gaps:          32/643 ( 5.0%)
# Score: 1548.5
# 
#
#=======================================

BSNT_00343___      1 ATGAGCTGTCCTGAACAAATTGTGCAGCTTATGCATATGCATCTTGATGG     50
                     ||||||||||..|||.||||.||.|.||||||||||..|.||.|.||.||
BPUM_0161___y      1 ATGAGCTGTCAGGAAAAAATCGTCCTGCTTATGCATCAGTATTTAGACGG     50

BSNT_00343___     51 AGATAT----CCTTCCAAAAGATGAACACGTATTAAATGAA--CATCTGG     94
                     .||.||    ||  ||  ||||.|||.|.|.||||||  ||  ||.|||.
BPUM_0161___y     51 GGACATTGAGCC--CC--AAGACGAAAAAGAATTAAA--AAGCCACCTGC     94

BSNT_00343___     95 AGACATGCGAGAAATGCAGAAAGCATTTTTACGAGATGGAGAAATCCATA    144
                     |..|.||.|||.|.|||.|.|..||||||.|..|.||.|||||||||||.
BPUM_0161___y     95 AATCGTGTGAGGAGTGCTGTACTCATTTTCAACAAATTGAGAAATCCATC    144

BSNT_00343___    145 GCGCTTGTACGGAGCACATCGCATGTCGAAGCCCCCGCGGATTTTACCGC    194
                     ||||||||.|.|||.|||||.|||.|.|||||.||..|.|||||.||.||
BPUM_0161___y    145 GCGCTTGTGCAGAGTACATCTCATATAGAAGCACCAACTGATTTCACTGC    194

BSNT_00343___    195 TAATGTCATGGCAAAATTGCCTAAGGAGAAGAAAAGAGCTTCTG----TA    240
                     .||.||.||||||....|.||.|||||    ||||.|||.|.||    |.
BPUM_0161___y    195 AAAGGTGATGGCAGGTCTTCCAAAGGA----AAAAAAGCGTGTGTCGATT    240

BSNT_00343___    241 AAAAGATGGTTCAGAACCCATCCCGTTATCGCAGCTGCTGCGGTATTCAT    290
                     .||||||||.|||.|.|.|||||..|.||.|..||.|||||..|.||..|
BPUM_0161___y    241 CAAAGATGGATCAAAGCTCATCCGCTGATGGTGGCCGCTGCCCTCTTTCT    290

BSNT_00343___    291 CATTTTGATGGGCGGGGGTTTTTTTAACAGCTGGCATAATGACCACAATT    340
                     ||||||||||||.||..||.|.||||..||||||.|||..||.||.||||
BPUM_0161___y    291 CATTTTGATGGGAGGCAGTCTGTTTACAAGCTGGAATACGGATCATAATT    340

BSNT_00343___    341 TCAGCGTGTCCAAGCAGCCGAATCTTGTGGTTCATAACCATACTGTGACC    390
                     ||||.|||||.||.|||||||||||.||.|||...||..||||.||||||
BPUM_0161___y    341 TCAGTGTGTCAAAACAGCCGAATCTCGTCGTTGTAAATGATACAGTGACC    390

BSNT_00343___    391 GTGCCAGAAGGTGAGACGGTCAAAGGTGATGTCACTGTCAAAAACGGCAA    440
                     ||.||..||||.||.||.||.|||||||||||||||||||||||.|||||
BPUM_0161___y    391 GTACCTAAAGGGGAAACCGTAAAAGGTGATGTCACTGTCAAAAATGGCAA    440

BSNT_00343___    441 GCTGATTATTAAAGGCAAAATAGACGGGGATGTAACCGTCGTAAACGGCG    490
                     |||||||.|..|||||||..|.||.||..||||.||||||||.||.||.|
BPUM_0161___y    441 GCTGATTGTAGAAGGCAAGGTTGATGGAAATGTCACCGTCGTCAATGGGG    490

BSNT_00343___    491 AAAAGTATATGGCCTCTGCTGGACAAGTCACCGGTCAGATTGAAGAAATC    540
                     ||.||...|..||.|||||.|||||||||||.|||||.|||.|.|||||.
BPUM_0161___y    491 AACAGCTGACTGCTTCTGCCGGACAAGTCACTGGTCAAATTAATGAAATT    540

BSNT_00343___    541 AATCAATTATTCGACTGGACATGGTACAAGATGAAGTCTGCGGGGAAAAG    590
                     |||.||.||||.||.||||..||||||||.|||||.|||.|.|...|||.
BPUM_0161___y    541 AATGAAGTATTTGATTGGATTTGGTACAAAATGAAATCTACAGCACAAAA    590

BSNT_00343___    591 TGTACTCGATG-----CATTCAATCCGAACGGAG-AAGAGTAA    627
                     |||    ||||     ||||..|.|.||  |||| ||.|||||
BPUM_0161___y    591 TGT----GATGCGGGTCATTGGACCAGA--GGAGCAAAAGTAA    627


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