Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00347 and BPUM_0164
See
Amino acid alignment /
Visit
BSNT_00347 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_00347___ybbT.1.24716.seq
# -bsequence dna-align/BPUM_0164___glmM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00347___ybbT-BPUM_0164___glmM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00347___ybbT-BPUM_0164___glmM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00347___ybbT
# 2: BPUM_0164___glmM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity: 1067/1362 (78.3%)
# Similarity: 1067/1362 (78.3%)
# Gaps: 30/1362 ( 2.2%)
# Score: 4165.0
#
#
#=======================================
BSNT_00347___ 1 ATGGGCAAGTATTTTGGAACAGACGGTGTAAGAGGTGTCGCCAATAGTGA 50
|||||||||||.||||||||.||.||||||||.|||||.||.|||||.||
BPUM_0164___g 1 ATGGGCAAGTACTTTGGAACTGATGGTGTAAGGGGTGTGGCGAATAGCGA 50
BSNT_00347___ 51 GCTTACACCTGAGCTGGCCTTTAAAGTCGGACGTTTCGGCGGTTATGTGC 100
..|.||.||.|||||.||.||||||.|.||..|.||.|||||.|||||||
BPUM_0164___g 51 ATTAACGCCAGAGCTCGCATTTAAAATTGGGAGATTTGGCGGCTATGTGC 100
BSNT_00347___ 101 TGACAAAAGACAAACAACGTCCAAAAGTGCTGATAGGCCGCGATACACGC 150
|.||.||.||.|||.||||||||||.||.||..|.||.||.||.|||||.
BPUM_0164___g 101 TCACGAAGGATAAAGAACGTCCAAAGGTACTCGTTGGGCGAGACACACGT 150
BSNT_00347___ 151 ATCTCCGGCCATATGCTGGAGGGAGCCCTTGTCGCCGG---ACTTTTATC 197
.|.||||||||||||||.||.|||||.||.||.||.|| |||| ||
BPUM_0164___g 151 GTATCCGGCCATATGCTAGAAGGAGCGCTCGTTGCTGGCTTACTT---TC 197
BSNT_00347___ 198 CATTGGCGCAGAAGTCATGCGCCTGGGTGTCATTTCTACACCAGGTGTAT 247
.|||||.||.|||||.|||||.||.|||||.|||||.|||||.||.||.|
BPUM_0164___g 198 AATTGGGGCTGAAGTGATGCGTCTAGGTGTGATTTCAACACCTGGAGTGT 247
BSNT_00347___ 248 CTTATTTGACAAAAGCGATGGACGCAGAGGCGGGCGTCATGATTTCCGCT 297
|.|||||.||.|||||.|||||||||||.|||||.||||||||.||.|||
BPUM_0164___g 248 CATATTTAACGAAAGCAATGGACGCAGAAGCGGGTGTCATGATCTCTGCT 297
BSNT_00347___ 298 TCTCATAACCCAGTGCAGGATAACGGCATCAAATTCTTTGGGGGAGATGG 347
|||||.||||||||.||.||.||.||.||.|||||||||||.||.||.||
BPUM_0164___g 298 TCTCACAACCCAGTTCAAGACAATGGAATTAAATTCTTTGGCGGTGACGG 347
BSNT_00347___ 348 ATTTAAGCTTTCTGATGAACAAGAGGCTGAAATTGAGCGCCTGATGGACG 397
.||||||||.||.||||||||.|||..|||||||||||..||||||||..
BPUM_0164___g 348 CTTTAAGCTGTCAGATGAACAGGAGAATGAAATTGAGCAGCTGATGGATC 397
BSNT_00347___ 398 AACCTGAAGATAAGCTGCCAAGACCTGTCGGAGCAGACCTTGGACTTGTA 447
|.||.|..|||.|..|||||.|.||.||.|||||.||.||||||...|||
BPUM_0164___g 398 AGCCGGTCGATCAATTGCCACGTCCAGTTGGAGCGGATCTTGGAACAGTA 447
BSNT_00347___ 448 AACGATTATTTTGAAGGCGGACAAAAATATCTGCAATTCTTAAAACAGAC 497
||.||.||.|||||||||||.||.|||||..||||||||||.||.|||||
BPUM_0164___g 448 AATGACTACTTTGAAGGCGGCCAGAAATACTTGCAATTCTTGAAGCAGAC 497
BSNT_00347___ 498 AGCTGATGAAGATTTCACAGGCATTCATGTGGCATTGGACTGTGCCCATG 547
|||.|||||.|||||||||||.||||||||||||.|.||||||||.||.|
BPUM_0164___g 498 AGCAGATGAGGATTTCACAGGTATTCATGTGGCACTTGACTGTGCACACG 547
BSNT_00347___ 548 GCGCAACATCATCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGAT 597
|||||||.||.||..|.||||||||..|.|||||.|||||||||||.|||
BPUM_0164___g 548 GCGCAACCTCTTCTCTAGCGACACATTTATTTGCGGATTTAGATGCGGAT 597
BSNT_00347___ 598 GTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGT 647
||.||.||||||||.||.||.||.||||||||.||.||.|||||.||.||
BPUM_0164___g 598 GTATCCACAATGGGAACATCACCAAACGGATTGAATATCAATGATGGTGT 647
BSNT_00347___ 648 TGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACG 697
.||.||.||||||||.||.|||||....|..|||||.||.|||||....|
BPUM_0164___g 648 AGGCTCAACTCATCCAGAGGCGCTTTCTGTTTTTGTAAAGGAGAAGGGTG 697
BSNT_00347___ 698 CGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTC 747
|.|||.|.|||||||||||.||.||||||||.|||||.||||||||||||
BPUM_0164___g 698 CAGATATTGGTCTTGCGTTTGATGGTGACGGTGACCGTCTGATTGCTGTC 747
BSNT_00347___ 748 GATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTC 797
|||||||||||..||||||||||||||||.|||||.|||||||||||..|
BPUM_0164___g 748 GATGAAAAAGGTGATATTGTAGACGGCGATCAAATTATGTACATATGTGC 797
BSNT_00347___ 798 AAAACATCTGAAATCAGAGGGCCGTTTAAAGGATGATACTTTGGTTTCAA 847
|....||.||||....||.|||||.|||||||||.|.|||.|.||.||.|
BPUM_0164___g 798 ACGTTATTTGAAGGGCGAAGGCCGATTAAAGGATAACACTGTCGTATCCA 847
BSNT_00347___ 848 CCGTGATGAGCAACCTCGGCTTCTATAAGGCGCTCGAAAAAGAAGGCATC 897
|.||.|||||.|||||.||.||.|||||.||||||||||||.|||||||.
BPUM_0164___g 848 CGGTCATGAGTAACCTAGGTTTTTATAAAGCGCTCGAAAAACAAGGCATT 897
BSNT_00347___ 898 AAAAGCGTACAGACAGCTGTCGGCGACCGCTACGTAGTAGAAGCAATGAA 947
||.|||.|.||.||||||||.||.||||||||.||.||.|||||.|||||
BPUM_0164___g 898 AAGAGCATCCAAACAGCTGTTGGTGACCGCTATGTGGTTGAAGCGATGAA 947
BSNT_00347___ 948 AAAAGACGGCTACAACGTCGGCGGAGAGCAGTCAGGACATCTT-ATTTTC 996
|||.||.||.||.||.||||||||.|||||||||||.|| ||| ||||||
BPUM_0164___g 948 AAAGGATGGATATAATGTCGGCGGTGAGCAGTCAGGCCA-CTTGATTTTC 996
BSNT_00347___ 997 CTTGATTACAACACGACAGGGGACGGTTTATTGTCTGCTATTATGCTGAT 1046
|||||||||||.||||||||.||.||..|..|.|||||.||||||||..|
BPUM_0164___g 997 CTTGATTACAATACGACAGGTGATGGCATGCTTTCTGCAATTATGCTTGT 1046
BSNT_00347___ 1047 GAACACTTTGAAAGCAACAGGCAAGCCGCTGTCAGAGCTTGCAGCTGAAA 1096
.|||||..|.|||||||||||.||..|..|||||||||||||||||||||
BPUM_0164___g 1047 CAACACACTCAAAGCAACAGGGAAAACATTGTCAGAGCTTGCAGCTGAAA 1096
BSNT_00347___ 1097 TGCAGAAGTTCCCGCAGCTGTTAGTCAATGTGAGAGTGACTGATAAATAT 1146
||.||||.|||||||||||..||||.|||||||.||||.|||||||||||
BPUM_0164___g 1097 TGGAGAAATTCCCGCAGCTTCTAGTGAATGTGAAAGTGTCTGATAAATAT 1146
BSNT_00347___ 1147 AAAGTTGAAGAAAATGAAAAAGTAAAAGCAGTTATTTCTGAAGTTGAAAA 1196
|||||.||||||||||||||||||||||||||.|||...||.||||||||
BPUM_0164___g 1147 AAAGTAGAAGAAAATGAAAAAGTAAAAGCAGTCATTCAAGAGGTTGAAAA 1196
BSNT_00347___ 1197 AGAAATGAACGGCGACGGCCGGATTTTGGTGCGCCCTTCAGGAACTGAAC 1246
|||.||||||||.||||||||.|||.|.||.||.||.||.|||||.||.|
BPUM_0164___g 1197 AGAGATGAACGGTGACGGCCGTATTCTTGTTCGTCCATCTGGAACAGAGC 1246
BSNT_00347___ 1247 CGCTCGTCCGTGTCATGGCTGAAGCGAAGACGAAAGAGCTGTGCGATGAG 1296
|.||.||.|||||||||||.||.|||||.||.||||||||.||.|||||.
BPUM_0164___g 1247 CACTTGTACGTGTCATGGCAGAGGCGAAAACAAAAGAGCTATGTGATGAA 1296
BSNT_00347___ 1297 TATGTCAATCGCAT------TGTTG---AAGTCGTCCGGTCA-GAAATGG 1336
|||||.|.|||.|| ||||| ||| | |||||||
BPUM_0164___g 1297 TATGTGACTCGAATTACCGCTGTTGTGAAAG----------AGGAAATGG 1336
BSNT_00347___ 1337 G-ATTAGAGTAA 1347
| ||| ||||||
BPUM_0164___g 1337 GTATT-GAGTAA 1347
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.