Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00486 and BPUM_0251
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence dna-align/BSNT_00486___yccH.1.24716.seq
# -bsequence dna-align/BPUM_0251___yccH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00486___yccH-BPUM_0251___yccH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00486___yccH-BPUM_0251___yccH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00486___yccH
# 2: BPUM_0251___yccH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 502/706 (71.1%)
# Similarity: 502/706 (71.1%)
# Gaps: 8/706 ( 1.1%)
# Score: 1684.0
#
#
#=======================================
BSNT_00486___ 1 ATGGTAAAAGTCGGACTTGTAGATGATTATCGAGTAGATTTAGAGAAGCT 50
|||.|||||||.||.||.||.||.|||||.||||||||||||||.|||||
BPUM_0251___y 1 ATGATAAAAGTAGGTCTCGTTGACGATTACCGAGTAGATTTAGAAAAGCT 50
BSNT_00486___ 51 GGAAGCGATCGTGTCCAGAATGCAGGACGTCGAAATTGTCTTTTCCACCG 100
|.|.||.||.||...|||||||.|||..||.||.|||||||||..|||..
BPUM_0251___y 51 GCATGCCATTGTAGGCAGAATGGAGGCTGTGGAGATTGTCTTTGTCACGC 100
BSNT_00486___ 101 ATTCAGCGAAGGAAGCCTACAGGCGGGTAAAGAACGGAGACATTGATCTG 150
|.|||||..||||.||.|||..|..|||.||.||.|||||.|||||||||
BPUM_0251___y 101 AGTCAGCAGAGGATGCATACGAGAAGGTCAAAAAAGGAGATATTGATCTG 150
BSNT_00486___ 151 CTGCTTGCCGATATCGAGATGCCCCATATGTCTGGCTACGAGCTTGCTGA 200
.||.|.||.||.||.||.||||||...|||||.||.||.||..|.||.||
BPUM_0251___y 151 TTGTTCGCAGACATTGAAATGCCCGGAATGTCCGGTTATGAATTAGCGGA 200
BSNT_00486___ 201 TTTGATCAAATCCCATTCACTTGATGTGGATGTGATTTTTGTTACCGGCC 250
|.|.||..|.||.|||.||||..||||.|||||..|.|||||.||.||..
BPUM_0251___y 201 TCTCATTCACTCTCATGCACTGAATGTCGATGTTGTCTTTGTGACAGGAA 250
BSNT_00486___ 251 ACGGCGGTTATGCGGTTCACGCCTTTGACCTGAACGTCCATGATTATATT 300
||.||||.||||||||.||.||.|||||..|.||.||.||||||||||||
BPUM_0251___y 251 ACAGCGGATATGCGGTCCATGCGTTTGATTTAAATGTTCATGATTATATT 300
BSNT_00486___ 301 ATGAAGCCGTACTATGCCGACTGTCTGGCCGCTTCCTTCGACCGTTACTT 350
||||||||.|||.|.||.||..|..|.|||...|||||.||.||.|||.|
BPUM_0251___y 301 ATGAAGCCCTACCAAGCTGATCGAATTGCCAAATCCTTAGAGCGCTACAT 350
BSNT_00486___ 351 G---AAAAAGAAAACGGAAACGAGTTTGAATGGGCGTATATTGATAAAGC 397
| |..|||.| |||.|..||..|..||||.||..|..|.||.||||
BPUM_0251___y 351 GTCCACCAAGCA---GGAGAAAAGCATACATGGACGGCTTCTCATTAAGC 397
BSNT_00486___ 398 AAAAGTCTGAAATGCACGTCCTGCAAAAGAAGGATATTATTTTCGCAGAA 447
|..||||.||.||.|||||.|||||||||||.|||.|.|||||.|..||.
BPUM_0251___y 398 AGCAGTCAGATATTCACGTGCTGCAAAAGAAAGATGTCATTTTTGTTGAG 447
BSNT_00486___ 448 CGGACGGGACGTTCGACGACGATTGTGACAACCGCCGAAGAGGTGCAAAC 497
||.||.||.||.||.||.||.|||||.|||||..|.|.|||..|.||.||
BPUM_0251___y 448 CGAACAGGCCGGTCAACCACCATTGTCACAACAACAGGAGATATCCAGAC 497
BSNT_00486___ 498 GTATCAAACATTAAATGATATTAAA-GGTGACCTGCCCGAAAAAGATTTT 546
.|||||.|||.||||.|| .||||| ||.||.||..|.||||||||||||
BPUM_0251___y 498 ATATCAGACACTAAACGA-GTTAAAGGGCGATCTAGCTGAAAAAGATTTT 546
BSNT_00486___ 547 CTTCGTTCGCATCGTTCCTTTATTATCAACATTCATTACATAAAGCATTT 596
.|.||.||.||.||.||.|||||.|||||.||.||||||||.|||.|.||
BPUM_0251___y 547 ATCCGCTCTCACCGATCATTTATCATCAATATACATTACATTAAGAACTT 596
BSNT_00486___ 597 TTCCTCTTATACCAAGCATTCATTCACAGTTTCCTTTGAGGGAACGTCTA 646
.||..|.|||.||||..|||||||.|..||.||.|||||.||.||...||
BPUM_0251___y 597 CTCGGCATATGCCAAAAATTCATTTATCGTGTCTTTTGAAGGTACTGATA 646
BSNT_00486___ 647 AAAAAGCGATGATCACTAAGCAGCAGCTTGATTATTTTCAAAACTACTAT 696
|||||||.|||||.||.||||||||..|.||.||.|||.|.||.||.|||
BPUM_0251___y 647 AAAAAGCCATGATGACAAAGCAGCAATTAGAATACTTTAAGAAATATTAT 696
BSNT_00486___ 697 TTTTGA 702
||||.|
BPUM_0251___y 697 TTTTAA 702
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