Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00530 and BPUM_0272

See Amino acid alignment / Visit BSNT_00530 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:21
# Commandline: needle
#    -asequence dna-align/BSNT_00530___opuAC.1.24716.seq
#    -bsequence dna-align/BPUM_0272___opuAC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00530___opuAC-BPUM_0272___opuAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00530___opuAC-BPUM_0272___opuAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00530___opuAC
# 2: BPUM_0272___opuAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 907
# Identity:     650/907 (71.7%)
# Similarity:   650/907 (71.7%)
# Gaps:          50/907 ( 5.5%)
# Score: 2216.5
# 
#
#=======================================

BSNT_00530___      1 ATGCTTAAAAAAATC-ATCGGCATCGGCGTTTCCGCCATGCTGGCGCTCT     49
                     ||| |..|||||.|| .||..|||.||..|..|||||.||||.|...|.|
BPUM_0272___o      1 ATG-TGGAAAAAGTCTCTCTACATTGGGATGACCGCCCTGCTTGTCTTTT     49

BSNT_00530___     50 CACTTGCGGCTTGCGGTTCAGAAAAC-GAAAAAAATGCATCCGCAGCAGA     98
                     .|||.||.|||||.|||.|| ||..| ||...||||||....||.|||.|
BPUM_0272___o     50 TACTAGCAGCTTGTGGTGCA-AAGTCGGACTCAAATGCGAGTGCGGCACA     98

BSNT_00530___     99 ACAGGTGAATAAGACCATCATCGGGATTGACCCCGGTTCAGGGATTATGT    148
                     .|||||||||||.|||||.|||||.|||||.||.|||||||||||||||.
BPUM_0272___o     99 GCAGGTGAATAAAACCATTATCGGCATTGATCCTGGTTCAGGGATTATGG    148

BSNT_00530___    149 CCCTGACTGACAAAGCGATGAAGGATTATGACCTGAATGACTGGACATTG    198
                     |.||.||.||..||||||..||||||||.|.|.|..|.||.|||||..|.
BPUM_0272___o    149 CGCTAACGGATCAAGCGAAAAAGGATTACGGCTTAGAGGATTGGACGGTC    198

BSNT_00530___    199 ATTTCTGCGTCAAGTGCTGCGATGACCGCTACGCTTAAAAAGTCATACGA    248
                     .|.|||||.||||||||.||.|||||.||.||.||.||.||.||.|||||
BPUM_0272___o    199 GTGTCTGCATCAAGTGCAGCCATGACTGCAACACTCAAGAAATCTTACGA    248

BSNT_00530___    249 CCGTAAGAAACCGATTATCATTACAGGATGGACACCGCACTGGATGTTCT    298
                     ||||||.||.||.||.|||||.||.||.||||..||.|||||||||||.|
BPUM_0272___o    249 CCGTAAAAAGCCCATCATCATCACTGGTTGGAATCCACACTGGATGTTTT    298

BSNT_00530___    299 CTAGATATAAGCTGAAATATCTCGATGATCCGAAACAATCTTATG--GCA    346
                     ||.|.|||.|..|.||||||.|.||||||||.||..|||||||.|  |.|
BPUM_0272___o    299 CTCGCTATGATTTAAAATATTTAGATGATCCAAAGAAATCTTACGGTGAA    348

BSNT_00530___    347 GCGCAGAGGAAATCCATACGATCACACGCAAAGGCTTCAGCAAA-GAACA    395
                     |||  ||.||.||.||||||||..|.||.||.||.|| .||||| ||..|
BPUM_0272___o    349 GCG--GAAGAGATTCATACGATTTCTCGTAAGGGGTT-TGCAAAGGATGA    395

BSNT_00530___    396 GCCGAATGCCGCAAAGCTTCTGAGCCAGTTTAAATGGACGCAAGACGAAA    445
                     ||||.||||.||.||..|.||..|.||||||||||||.|.|||||.||.|
BPUM_0272___o    396 GCCGGATGCAGCCAAAATGCTTGGTCAGTTTAAATGGTCTCAAGATGACA    445

BSNT_00530___    446 TGGGCGAAATCATGAT-------CAAGGTGG-AGGAAGGCGAGAAACCTG    487
                     ||||||||.|||||||       ||||.||| |..||            .
BPUM_0272___o    446 TGGGCGAAGTCATGATCGATATCCAAGATGGTATCAA------------T    483

BSNT_00530___    488 CCAAA-GTTGCTGCCG---AGTACGTCAATAAACACAAGGATCAGATTGC    533
                     ||||| |.||||||||   |.||.||.||.|||||.||.||.||..|.||
BPUM_0272___o    484 CCAAAGGATGCTGCCGTTAAATATGTGAAAAAACATAAAGACCAAGTAGC    533

BSNT_00530___    534 CGAATGGACAAAAGGCGTTCAAAAGGTAAAGGGAGACAAAATCAACCTTG    583
                     ..||||||||||||||||..||||....||.||.|.||||.||||.||||
BPUM_0272___o    534 AAAATGGACAAAAGGCGTGAAAAAATCGAATGGTGCCAAAGTCAATCTTG    583

BSNT_00530___    584 CCTATGTGGCGTGGGACAGTGAGATTGCAAGTACAAACGT--CATAGGCA    631
                     ||||.||.||.|||||.|||||||||||||||||.||.||  |   .|||
BPUM_0272___o    584 CCTACGTTGCATGGGATAGTGAGATTGCAAGTACCAATGTTGC---TGCA    630

BSNT_00530___    632 -AAGTCTTAGAAGACTTGGGCTATGAGGTAA---CACTT--ACTCAGGTA    675
                      ||||.||     .|.||.|||..||..|||   .||||  ||||||||.
BPUM_0272___o    631 GAAGTGTT-----GCGTGAGCTCGGATTTAAAGTGACTTTGACTCAGGTG    675

BSNT_00530___    676 GAGGCTGGGCCGATGTGGACTGCAATTGCGACGGGAAGTGCGGATGCATC    725
                     ||.||.||.||.||||||||.||||||||.||.|||||||||||||||||
BPUM_0272___o    676 GAAGCAGGTCCAATGTGGACAGCAATTGCAACTGGAAGTGCGGATGCATC    725

BSNT_00530___    726 CCTTTCCGCATGGCTGCCGAATACCCATAAAGCATACGCCGCTAAATATA    775
                     ..|.||.||.||||||||.|||||.||||||.|.||.||.||.||.|.||
BPUM_0272___o    726 ATTATCTGCTTGGCTGCCAAATACGCATAAAACGTATGCAGCAAAGTTTA    775

BSNT_00530___    776 AAGGCAAATATGATGATATTGGCACAAGTATGACGGGTGTGAAGATGGGG    825
                     ||||.||||||||||||.|.||.||||||||||..|||.|....|||||.
BPUM_0272___o    776 AAGGGAAATATGATGATCTAGGTACAAGTATGAAAGGTCTTCGCATGGGT    825

BSNT_00530___    826 CTTGTTGTTCCTCAATATATGAAAAATGTCAACTCAATTGAAGATTTGAA    875
                     ||.||||||||...|||||||||.||.||||||||.||||||||||||||
BPUM_0272___o    826 CTAGTTGTTCCGACATATATGAAGAACGTCAACTCGATTGAAGATTTGAA    875

BSNT_00530___    876 GAAGTAA    882
                     .||.||.
BPUM_0272___o    876 AAAATAG    882


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