Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00532 and BPUM_0276

See Amino acid alignment / Visit BSNT_00532 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:21
# Commandline: needle
#    -asequence dna-align/BSNT_00532.1.24716.seq
#    -bsequence dna-align/BPUM_0276___ycgA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00532-BPUM_0276___ycgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00532-BPUM_0276___ycgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00532
# 2: BPUM_0276___ycgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1471
# Identity:    1072/1471 (72.9%)
# Similarity:  1072/1471 (72.9%)
# Gaps:          77/1471 ( 5.2%)
# Score: 3805.5
# 
#
#=======================================

BSNT_00532         1 ATGAGTATGCCAGCAGCCGAAACACAGCCTAAGAAAAAACGAATGACATT     50
                     ||||..|   |||||||.|.|.|||..||..|||||.||..||..|.|.|
BPUM_0276___y      1 ATGAAAA---CAGCAGCAGTATCACCACCAGAGAAACAAAAAAGAAAACT     47

BSNT_00532        51 TAAAATGCCTGACGCCTATGTCCTCTTATTTATGATTGCTTTCATTTGCG    100
                     |.|||||||.||.||.|||||.|||.|||||||.|||||..|||||||..
BPUM_0276___y     48 TCAAATGCCGGATGCGTATGTTCTCCTATTTATCATTGCGCTCATTTGTA     97

BSNT_00532       101 CAATCGCTTCATATATTGTGCCGGCAGGTGAATTTGACCGCGTGACAAAG    150
                     |.||.||..|.|||.|||||||.|||||||||||||||||...||||...
BPUM_0276___y     98 CCATTGCCACGTATTTTGTGCCAGCAGGTGAATTTGACCGAAAGACATCA    147

BSNT_00532       151 GGGGATGTCACGACCGCTGTTCCGGGAAGCTATCATTCAATTGAACAGTC    200
                     |||||..|.||.||.||||||||.||.||||||||....|||||.||.||
BPUM_0276___y    148 GGGGAGATTACAACAGCTGTTCCTGGCAGCTATCACCGCATTGATCAATC    197

BSNT_00532       201 TCCGGT-----CAGCTTGATCAGCTTTTTTACTTCTCTACAGGATGGAAT    245
                     .||.||     |||     |..||||||||||..||.|.|||||.||.||
BPUM_0276___y    198 ACCCGTAAGTCCAG-----TAGGCTTTTTTACAGCTATTCAGGAAGGGAT    242

BSNT_00532       246 GGTTGGATCAGCACCCATCATCTTTCTGATTCTATTCACAGGCGGCACCA    295
                     |||.||.||..|..|.||.||.|||||.|||.||||.||.|||||.||||
BPUM_0276___y    243 GGTAGGGTCTTCTTCTATTATTTTTCTCATTTTATTTACTGGCGGAACCA    292

BSNT_00532       296 TTGCTATTCTAGAAAAAACGGGTGCCATCAATGGCCTGATTTACAATGTC    345
                     ||||.|||.|.||.|||||.||||||||.||.||..|||||.||.|||||
BPUM_0276___y    293 TTGCCATTTTGGAGAAAACAGGTGCCATTAACGGAATGATTCACCATGTC    342

BSNT_00532       346 ATCAGCAAATTCCGCACAAAGCAATTATTATTTATTTGTATTGTCGGCGC    395
                     |||||||.|||.|..||||||||||||||.||||||||||||||.||.|.
BPUM_0276___y    343 ATCAGCAGATTTCAAACAAAGCAATTATTGTTTATTTGTATTGTTGGAGG    392

BSNT_00532       396 ATTGTTCTCCATTCTCGGAACAACCGGGATTGTCGTGAATTCAGTTATCG    445
                     |||.||.||..|.||.|||||.|||||||||||||||||.||.|||||||
BPUM_0276___y    393 ATTATTTTCAGTGCTTGGAACGACCGGGATTGTCGTGAACTCTGTTATCG    442

BSNT_00532       446 GTTTTATCCCCATCGGCCTCATTGTGGCACGATCCTTAAAATGGGACGCA    495
                     |.|||||.||.|||||..|||||||||||.|||||||.||||||||.||.
BPUM_0276___y    443 GATTTATTCCAATCGGGATCATTGTGGCAAGATCCTTGAAATGGGATGCT    492

BSNT_00532       496 GTCGCGGGAGCCGCTGTTATTTACATCGGCTGCTACGCTGGATTTAACTC    545
                     ||.||.|||||.||.||.||||||||||||||.||.||.||.||||||.|
BPUM_0276___y    493 GTAGCAGGAGCGGCGGTCATTTACATCGGCTGTTATGCCGGGTTTAACGC    542

BSNT_00532       546 CACCATATTATCACCGTCACCGCTCGGTTTATCACAATCAATCGCGGAGC    595
                     .|||||.||.||.||.||.||.|||||.|||||.||..|.||.||.||||
BPUM_0276___y    543 AACCATTTTGTCTCCATCCCCACTCGGGTTATCTCAGACGATTGCAGAGC    592

BSNT_00532       596 TCCCTCTTTTTTCTGGAATCGGCCTGCGAGTTGTGATATACATATGCTTT    645
                     |.||..||||||||||.||.||||||||.||..|.|||||       |.|
BPUM_0276___y    593 TACCGATTTTTTCTGGCATTGGCCTGCGTGTCATTATATA-------TCT    635

BSNT_00532       646 TTGCTGTCT----TCTATTATT---TATATCTATTTGTATACGAG-----    683
                     |||||.|||    ||||.||||   ||.||||||||.|||||.||     
BPUM_0276___y    636 TTGCTTTCTTATATCTAGTATTGTGTACATCTATTTATATACAAGACGCC    685

BSNT_00532       684 --AAAATTAAAAAAATCAAAAGATGCC-AGTGTGTTAGGAACAGATTGGT    730
                       ||.|.||||.|   .||..||.||| ..||.||.|..||     ||||
BPUM_0276___y    686 TCAAGAATAAAGA---GAAGGGAAGCCTTCTGGGTGATCAA-----TGGT    727

BSNT_00532       731 TCCCTGCGGCAGGAATGGGCGAAGCCGGTAAAGAA---GAAGATCAGCCA    777
                     |.||||||...||..|.||||.|.|.|.|..||||   |..||..||||.
BPUM_0276___y    728 TTCCTGCGAAGGGGCTTGGCGGATCTGATGCAGAATCTGTGGACAAGCCT    777

BSNT_00532       778 GTGCCGTTTACCGTTCGCCATAAGCTGATTTTGGCTGTGGCGGGACTCTC    827
                     |   |.|||||.|...|.|||||..|||||||.||.|||...|||.|.||
BPUM_0276___y    778 G---CATTTACGGGCAGACATAAATTGATTTTAGCAGTGTGTGGATTGTC    824

BSNT_00532       828 ACTTGTCGGATTTTTATACGGCGCTTTGAAGCTTGGCTGGTCAGATTCCC    877
                     .||||..||.||.|||||.|||||..|..|||||||||||.|.|||....
BPUM_0276___y    825 TCTTGGGGGCTTCTTATATGGCGCGCTTCAGCTTGGCTGGACTGATAAGG    874

BSNT_00532       878 AAATGGCTGCGA--CATTTATTTTTAT-----TTCTGTCCTTGCCGGTTT    920
                     |||||||.| ||  | ||.|||||.||     ||..|     ||.||.||
BPUM_0276___y    875 AAATGGCAG-GAGTC-TTCATTTTCATGGCGATTGCG-----GCTGGATT    917

BSNT_00532       921 AATAGGCAGACTTGCGGCGAACGATATTGCCAAAACCTTCATTACG--GG    968
                     |.|.||..||.|.||.||.||.||||||||.|||||.||.||  ||  ||
BPUM_0276___y    918 ACTTGGTGGATTAGCAGCCAATGATATTGCGAAAACGTTTAT--CGTCGG    965

BSNT_00532       969 CTGCCAAAGCCTTGTATATGGGGCGCTGATTGTCGGGATGGCACGAAGCA   1018
                     |||.|||||||||||.||.||.||.||.||||||||.||||||||..|||
BPUM_0276___y    966 CTGTCAAAGCCTTGTTTACGGCGCACTCATTGTCGGAATGGCACGCTGCA   1015

BSNT_00532      1019 TTTCCGTTATCCTTGAAAATGGAAAGCTTCTCGATACTGTCGTCAATGCT   1068
                     ||||.||.||..|.|||||.||.||||||||.||||||||.|||||||..
BPUM_0276___y   1016 TTTCTGTCATTTTGGAAAACGGTAAGCTTCTTGATACTGTGGTCAATGGC   1065

BSNT_00532      1069 TTGGC---TTCACTTTTGGAC-GGATTCAGCCCGATTGCCGGGGCAATCG   1114
                     |||||   |...||    ||| |||||.||.||.|||||.||.||.||.|
BPUM_0276___y   1066 TTGGCGAGTATGCT----GACAGGATTTAGTCCAATTGCTGGTGCGATTG   1111

BSNT_00532      1115 GCATGTATATCGCCAGTGCGCTGCTTCATTTTCTCATCTCTTCAGGGTCT   1164
                     |.||||||||.||.|||||.||.|||||.|||.|.||.||.|||||.||.
BPUM_0276___y   1112 GGATGTATATTGCGAGTGCACTTCTTCACTTTTTGATTTCATCAGGATCA   1161

BSNT_00532      1165 GGCGAAGCCGTTGTATTTATTCCAATCCTGGCGCCGCTCGCTGATTTGAT   1214
                     ||.|||||.|||||.|||||||||||.||.||||||||.||||||||.||
BPUM_0276___y   1162 GGAGAAGCGGTTGTCTTTATTCCAATTCTTGCGCCGCTGGCTGATTTAAT   1211

BSNT_00532      1215 GGAAATCACGAGACAGGTTGCGGTGGAGGCGGTTATGCTTGGAGAAGGGG   1264
                     ||..|||||.||||||||.||.||.||.||.|||||||||||.|||||||
BPUM_0276___y   1212 GGGCATCACAAGACAGGTCGCTGTAGAAGCAGTTATGCTTGGCGAAGGGG   1261

BSNT_00532      1265 TCGTCAACTGTGTGAACCCGACATCCGGCGTTCTCATGGCAGTGCTTGCC   1314
                     |.||.||||||.|.||.|||||.||.|||||..|.|||||.||||||||.
BPUM_0276___y   1262 TGGTTAACTGTATCAATCCGACGTCAGGCGTGTTGATGGCTGTGCTTGCT   1311

BSNT_00532      1315 GCCAGCGGTATTCCGTATGTCAAGTGGCTGCGGTTTATGGTGCCGCTTGC   1364
                     ||.||.||||||||.|||||.|||||||||||.|||||||||||||||||
BPUM_0276___y   1312 GCAAGTGGTATTCCTTATGTGAAGTGGCTGCGTTTTATGGTGCCGCTTGC   1361

BSNT_00532      1365 TCTGATTTGGTTCTTGATCGGGCTTGTCTTTATCGTG-ATCGGCGTCATG   1413
                     .||.||||||||..|.||.||.||||||||||| .|| ||||||||.|||
BPUM_0276___y   1362 ACTCATTTGGTTTGTCATTGGCCTTGTCTTTAT-TTGTATCGGCGTGATG   1410

BSNT_00532      1414 ATCAATTGGGGGCCGTTTTAA   1434
                     |||||.|||||.||.|.||||
BPUM_0276___y   1411 ATCAACTGGGGACCTTATTAA   1431


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