Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00737 and BPUM_0391
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:30
# Commandline: needle
# -asequence dna-align/BSNT_00737___ydaG.1.24716.seq
# -bsequence dna-align/BPUM_0391___ydaG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00737___ydaG-BPUM_0391___ydaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00737___ydaG-BPUM_0391___ydaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00737___ydaG
# 2: BPUM_0391___ydaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 297/467 (63.6%)
# Similarity: 297/467 (63.6%)
# Gaps: 88/467 (18.8%)
# Score: 897.5
#
#
#=======================================
BSNT_00737___ 1 ATGAATCAGCAAGA--CATT-AAACAAAAAGT-----GCTTGATGTTCTA 42
||| ||| ||||| .||| ||||||||.|| ||.| || ||
BPUM_0391___y 1 ATG--TCA-CAAGAAGAATTAAAACAAAAGGTATTAAGCCT-AT----TA 42
BSNT_00737___ 43 GATCACCATAAAGTAGGTTCGCTCGCAACAGTTCAAAAGGGCAAACCGAA 92
|||.|.||.||.||.||..|.|||||.||.|||.||.|||..||.|||.|
BPUM_0391___y 43 GATGAACAAAAGGTCGGAACACTCGCGACCGTTGAACAGGATAAGCCGCA 92
BSNT_00737___ 93 TTCCCGCTACATGACTTTTTTCCATGACGGGCTGACGATT-TACACACCG 141
|.|||||||||||||||||||||||||.||.||||| ||| ||.|||||.
BPUM_0391___y 93 TACCCGCTACATGACTTTTTTCCATGAGGGACTGAC-ATTATATACACCA 141
BSNT_00737___ 142 ACAAGCAAGGAAACTCATAAAGCGGAAGAAATTGAGAACAACCCCAATGT 191
|||||.||.|||||.||||||||.||.||||||||.||.|||||.|||||
BPUM_0391___y 142 ACAAGTAAAGAAACACATAAAGCAGACGAAATTGAAAAAAACCCGAATGT 191
BSNT_00737___ 192 CCACATT-TTATTAGGCTATGATTGTGAAGGCTTTGGCGACGCATATGTC 240
.||.||| |.||| ||.|||....|||||||.||.||.|||.||||||..
BPUM_0391___y 192 GCATATTCTCATT-GGGTATTCAGGTGAAGGATTCGGTGACACATATGCA 240
BSNT_00737___ 241 GAAGTTGCCGGAAAAGCCA---AAATCAACAATTCGGCAGAACTCAAGGA 287
|||.|.||.||.|..||.| .||.|.||.|| .|||||||.|..||
BPUM_0391___y 241 GAAATCGCAGGTACCGCTACATTAACCGACGAT---CCAGAACTGATCGA 287
BSNT_00737___ 288 C-------------AAAATATGGAGTTCCAAATTAGAGCGCTGGTTTGAC 324
| |..|.|||||| ||| ||||||.|.
BPUM_0391___y 288 CCGCCTTTGGTCTGAGGAAATGGAG----AAA---------TGGTTTAAA 324
BSNT_00737___ 325 GGCAAGGATGATCCGAATCTGGTGATTCTTGAA-ATTGAACCGGAGGATA 373
||.||.|||||||||||.||.||||||| |||| |||||.|| ||..
BPUM_0391___y 325 GGAAAAGATGATCCGAACCTAGTGATTC-TGAAGATTGATCC----GACC 369
BSNT_00737___ 374 TC--------AGATTAATGA---ATGCCG------GGGAGAAAACACCGG 406
|| |.||.||||| |.|||| .|.|||| .
BPUM_0391___y 370 TCCATTCGTTACATGAATGAAGGAAGCCGTACGCCAGCAGAA-------T 412
BSNT_00737___ 407 TCTCACTCGAACTATAA 423
|.|||||..||
BPUM_0391___y 413 TATCACTTTAA------ 423
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