Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00751 and BPUM_0413

See Amino acid alignment / Visit BSNT_00751 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence dna-align/BSNT_00751___mntH.1.24716.seq
#    -bsequence dna-align/BPUM_0413___mntH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00751___mntH-BPUM_0413___mntH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00751___mntH-BPUM_0413___mntH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00751___mntH
# 2: BPUM_0413___mntH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1310
# Identity:     948/1310 (72.4%)
# Similarity:   948/1310 (72.4%)
# Gaps:          67/1310 ( 5.1%)
# Score: 3260.5
# 
#
#=======================================

BSNT_00751___      1 ATG---AACAAGGACAT-----CACA-GCACA-ATCTCCCCGTTCCAAAG     40
                     |||   |||||..||||     |||| ||||| ||.|        ||.||
BPUM_0413___m      1 ATGACAAACAAATACATCGAGGCACAGGCACACATGT--------CAGAG     42

BSNT_00751___     41 CCGTCCAAG-ATGCGCTTGACGGGAAAATCAGAGGATTCAGAGGGCTGCT     89
                     .|..|..|| .|||.|||||.||||||.|||.||||||.|||.|.||.||
BPUM_0413___m     43 GCAGCTGAGCGTGCACTTGAGGGGAAAGTCAAAGGATTTAGAAGACTCCT     92

BSNT_00751___     90 CCCTTTTCTCGGCCCTGCATTTATAGCAGCCATTGCCTATATTGATCCCG    139
                     .|||||||||||||||||.|||||.|||||||||||.|||||||||||.|
BPUM_0413___m     93 TCCTTTTCTCGGCCCTGCTTTTATCGCAGCCATTGCTTATATTGATCCAG    142

BSNT_00751___    140 GCAACTTCGCAACGAATATTTCGGCGGGTTCTAAATACGGATATATGCTC    189
                     |.||.||.||.||.||.|||.||||.||.||.|||||.|||||..|.||.
BPUM_0413___m    143 GAAATTTTGCCACCAACATTGCGGCTGGCTCCAAATATGGATACCTCCTT    192

BSNT_00751___    190 TTATGGGTGA-TCTTATTTTCTAATATCATGGCCCTTT--TAATTCAATC    236
                     |||||||||| |||.| |.||.|||.||||||  ||||  |.|||||.||
BPUM_0413___m    193 TTATGGGTGATTCTCA-TATCAAATCTCATGG--CTTTGCTCATTCAGTC    239

BSNT_00751___    237 CCTATCCGCCAAACTCGGTATTGCGACAGGCAAAAATCTGCCTGAGGTTG    286
                     |.|||||||.||.|||||.||.||||||||.|||||..|.|||||..|.|
BPUM_0413___m    240 CTTATCCGCAAAGCTCGGAATCGCGACAGGTAAAAACTTACCTGAAATCG    289

BSNT_00751___    287 CCCGTGAAGAATTCCCGAAGCCTGTCTCGATCGGATTATGGATTCAGGGC    336
                     |.||||||||.||.||.||.||.||.||||||||.|||||||||||.||.
BPUM_0413___m    290 CACGTGAAGAGTTTCCAAAACCCGTTTCGATCGGTTTATGGATTCAAGGA    339

BSNT_00751___    337 GAGCTTGTCATTATCGCAACTGACCTGGCGGAATTTATCGGAGCGGCTCT    386
                     |||||.||||||||.||.||.||..|.||.||.||||||||.|||||.||
BPUM_0413___m    340 GAGCTCGTCATTATTGCCACGGATTTAGCTGAGTTTATCGGGGCGGCACT    389

BSNT_00751___    387 GGGACTGTATTTGCTGTTCGGCATGCCGATGCTTGAAGCGTCTATTATTG    436
                     .||..|.||.|||||.||..|.||.|||.||||.|||||.||||||||.|
BPUM_0413___m    390 TGGTTTATACTTGCTCTTTCGAATCCCGCTGCTCGAAGCATCTATTATCG    439

BSNT_00751___    437 CGGCGATCGGTTCTTTCGCGATATTGGAGCTTCAGCGCCGCGGTTATCGC    486
                     |.||.|||||.||.||.|||||||||||.||.||..|.||.||.|||||.
BPUM_0413___m    440 CAGCTATCGGCTCATTTGCGATATTGGAACTGCAAAGACGAGGATATCGA    489

BSNT_00751___    487 TCACTTGAAGCCGGTATTGCCGGTATGCTGTTTGTGGTCGTGATCGCCTT    536
                     .|..|.|||||.||||||.|.||.||||||||.||.|||||||||||  |
BPUM_0413___m    490 GCTTTAGAAGCAGGTATTACAGGCATGCTGTTCGTTGTCGTGATCGC--T    537

BSNT_00751___    537 TGCGCTG--CAGACCTTTTTCGCAAAGCCTGATGCC----GTGTCAGTGA    580
                     |.|||||  ||.||||||.||||.||.||.|||..|    |||||..|| 
BPUM_0413___m    538 TTCGCTGTTCAAACCTTTGTCGCTAAACCCGATATCGCAAGTGTCGCTG-    586

BSNT_00751___    581 TGAAG-GGCCTTTTTGTCCCGGCGTTTCATGGCACCGACAGTGTGCTTCT    629
                         | ||.||.||..|.||....|||.|||||.|.|||||||||||.||
BPUM_0413___m    587 ----GCGGACTGTTCATTCCAAAATTTGATGGCGCAGACAGTGTGCTGCT    632

BSNT_00751___    630 TGCAGCGGGTATTCTTGGCGCAACTGTTATGCCGCACGCCATTTATTTAC    679
                     |||.||.||.|||.|.||.||.||.||.|||||.|||||.|||||.||||
BPUM_0413___m    633 TGCCGCTGGAATTTTAGGTGCGACCGTGATGCCTCACGCAATTTACTTAC    682

BSNT_00751___    680 ACTCTGCCCTTACACAGCGGCGGGTGGTTGGCAAAACTGATGCAGAACGG    729
                     |.||.||..|.||.||..|..|.||.||.||||.|||.||     ||.||
BPUM_0413___m    683 ATTCAGCTTTAACCCAAAGAAGAGTCGTCGGCAGAACGGA-----AAAGG    727

BSNT_00751___    730 AAAAAA-----ATCTTTAGGTTTGAATTTATTGATATTTTAATAGCGATG    774
                     |.||||     ||.||..|.|||||.|||.|.|||||..|.||.||.|||
BPUM_0413___m    728 AGAAAAAGCAGATTTTCCGCTTTGAGTTTTTAGATATCCTCATTGCAATG    777

BSNT_00751___    775 CTGATTGCAGGGGCTATTAATGCAAGTATGCTGATTGTGGCTGCCGCATT    824
                     .|..|.||.||.||.||.|||||.||.|||.||||||||||||||||.||
BPUM_0413___m    778 ATCGTCGCCGGAGCCATCAATGCCAGCATGTTGATTGTGGCTGCCGCTTT    827

BSNT_00751___    825 ATTCTTCAAAAACGGCCTGTTTGTTGAGGATCTCGACGTCGCATTTCAGC    874
                     |||.|..|||||.|||||.||||||||.|||.|.||.||.||.|||||||
BPUM_0413___m    828 ATTTTATAAAAATGGCCTTTTTGTTGAAGATTTAGATGTTGCGTTTCAGC    877

BSNT_00751___    875 AATTCGG-ACATCTTGTCA-GTCCTATGTCTGCGGCTTTATTCGGGATCG    922
                     |.||.|| ||| ||.| || |.|||.|.||.||...||||||.||..|.|
BPUM_0413___m    878 ATTTTGGTACA-CTCG-CAGGACCTGTATCAGCCATTTTATTTGGTGTAG    925

BSNT_00751___    923 GGCTGCTCGTTGCCGGTCTATCCAGTTCGTCTGTCGGTACACTTTCAGGC    972
                     |.|||||.||.|||||.||||||||.||.||||||||||||.|.||||||
BPUM_0413___m    926 GTCTGCTTGTAGCCGGACTATCCAGCTCTTCTGTCGGTACATTGTCAGGC    975

BSNT_00751___    973 GACGTGATTATGCAAGGATTTA-TCAACTACCGCATTCCGCTGTATGTAC   1021
                     ||..|.||||||||.||.|||| |||| |||||.||||||||.|||||.|
BPUM_0413___m    976 GATATCATTATGCAGGGCTTTATTCAA-TACCGAATTCCGCTTTATGTTC   1024

BSNT_00751___   1022 GGCGTTTTATCACGATCATTCCGCCGATCTTGATCATCGCGTCAGGTGTT   1071
                     |.||..|.||.||.||||||||.||.||...|||.||.||.||.||.||.
BPUM_0413___m   1025 GCCGGCTGATTACCATCATTCCTCCTATTGCGATTATTGCATCTGGAGTG   1074

BSNT_00751___   1072 AATCCGACGACCGCTCTCGTACTGAGCCAGGTCGTGCTGTCCTTCGGGAT   1121
                     ||||||||..||||.||.||..||||.||||||||..|.||.||.|||||
BPUM_0413___m   1075 AATCCGACCTCCGCACTTGTGATGAGTCAGGTCGTCTTATCGTTTGGGAT   1124

BSNT_00751___   1122 CGCCTTTGCCCTCATTCCGCTTATTATGTTTACAAGCAATAAACGGATCA   1171
                     .||||||||..|.||||||||.|||.|.||||||||.||.|||||.||.|
BPUM_0413___m   1125 TGCCTTTGCTTTAATTCCGCTCATTTTATTTACAAGTAAAAAACGAATTA   1174

BSNT_00751___   1172 TGGGATCTCTG-ATCAAC----GCCAAATGGGTCACAGTGGTGTCTTGGC   1216
                     ||||     || ||.|||    |||...|||||.||||...|.||||||.
BPUM_0413___m   1175 TGGG-----TGAATTAACGAATGCCCGCTGGGTGACAGGAATATCTTGGG   1219

BSNT_00751___   1217 TGATTGCTG-TATTGATCGTTGCTTTGAATGTGTTTTTAATTGTAGATAC   1265
                     ||||.||.| |.||| |.||.||..|.|||.|.||.||||||||||||||
BPUM_0413___m   1220 TGATAGCAGCTCTTG-TTGTAGCACTTAATCTTTTCTTAATTGTAGATAC   1268

BSNT_00751___   1266 GTTTCGATAA   1275
                     ||||...|||
BPUM_0413___m   1269 GTTTATGTAA   1278


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