Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00800 and BPUM_0442
See
Amino acid alignment /
Visit
BSNT_00800 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00800___rsbT.1.24716.seq
# -bsequence dna-align/BPUM_0442___rsbT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00800___rsbT-BPUM_0442___rsbT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00800___rsbT-BPUM_0442___rsbT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00800___rsbT
# 2: BPUM_0442___rsbT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 309/412 (75.0%)
# Similarity: 309/412 (75.0%)
# Gaps: 20/412 ( 4.9%)
# Score: 1117.5
#
#
#=======================================
BSNT_00800___ 1 ATGAACGACCAATCCTGTGTAAAAATCATGACAGAATGGGATATTGTGGC 50
|||||.||||||||||||||||||||..||||.|||||||||||.||.||
BPUM_0442___r 1 ATGAAAGACCAATCCTGTGTAAAAATATTGACGGAATGGGATATAGTCGC 50
BSNT_00800___ 51 CGCCAGACAGCTGGGACGAAACGTTGCGAAAGAACTGGGTTTCGGCACGG 100
.||.|||||..||||.||.||.|||||.||||||||.|||||.||.||.|
BPUM_0442___r 51 AGCAAGACAATTGGGGCGCAATGTTGCAAAAGAACTTGGTTTTGGAACAG 100
BSNT_00800___ 101 TAGACCAGGCTAGAATTACAACGGCTATTTCAGAATTAGCCAGGAATATT 150
|.|||||.||.||||||||.|||||.||||||||||||||..|.||.||.
BPUM_0442___r 101 TTGACCAAGCAAGAATTACGACGGCCATTTCAGAATTAGCTCGAAACATC 150
BSNT_00800___ 151 TATTTATATGCCGGCAAAGGGCAGATTGGAATTGAACAGGTCGCAGACAG 200
||||||||.||.||.|||||.||||||.|.||.|||.|.|| ||..|
BPUM_0442___r 151 TATTTATACGCTGGTAAAGGTCAGATTTGTATAGAAGAAGT----GATGG 196
BSNT_00800___ 201 A----GGAAAAAAAGGCCTGAAAATCAT---AGCGGAAGACCAAGGG-CC 242
| |||||....||.||.||..|||| |||.||.| |||| ||
BPUM_0442___r 197 AGCGTGGAAAGCGTGGACTCAAGGTCATCGCAGCCGATG----AGGGTCC 242
BSNT_00800___ 243 GGGAATTCCT-GATATCCGAAAAGTCATGGAAGACGGGTTTTCAACGTCT 291
.||.| ||.| |||||.||.|||||.|||||||||||.|||||.||.||.
BPUM_0442___r 243 TGGCA-TCATGGATATACGTAAAGTGATGGAAGACGGATTTTCTACATCA 291
BSNT_00800___ 292 GGAGGACTTGGTGCGGGACTTCCCGGG-GTCAAAAGGCTGATGGATGAAT 340
||.|||||.||.||.|| |||.||||| ||||.|||.|||||||||||||
BPUM_0442___r 292 GGTGGACTCGGAGCAGG-CTTGCCGGGCGTCAGAAGACTGATGGATGAAT 340
BSNT_00800___ 341 TCAGCTTAAATTCCGTAACGGGGGAAGGAACAGAGATACAAGCCATCAAA 390
|.|..|||.||||.|.|.|.|...|||||||.|||||||||||..|.||.
BPUM_0442___r 341 TTAAATTAGATTCTGCACCAGAACAAGGAACGGAGATACAAGCTGTTAAG 390
BSNT_00800___ 391 TGGCTTCGGTAG 402
||||||||.|||
BPUM_0442___r 391 TGGCTTCGCTAG 402
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.