Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00802 and BPUM_0444
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00802___rsbV.1.24716.seq
# -bsequence dna-align/BPUM_0444___rsbV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00802___rsbV-BPUM_0444___rsbV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00802___rsbV-BPUM_0444___rsbV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00802___rsbV
# 2: BPUM_0444___rsbV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 236/347 (68.0%)
# Similarity: 236/347 (68.0%)
# Gaps: 34/347 ( 9.8%)
# Score: 731.5
#
#
#=======================================
BSNT_00802___ 1 ATGAATATAAATGTTGATGTGAAGCAAAACGAGAATGATATA---CAAGT 47
||||||||...||| |||.|||.||.|.||| ||| .
BPUM_0444___r 1 ATGAATATGTCTGT------------AAAAGAGCATCAAATAGATCAA-A 37
BSNT_00802___ 48 AAAC----ATT----GCA--GGAGAAATTGATGTATACTCAGCCCCGGTG 87
|||| ||| .|| ||||||||.|||||.|||||.||.||...|
BPUM_0444___r 38 AAACGAAAATTAGTGTCAGTGGAGAAATCGATGTGTACTCTGCTCCTCAG 87
BSNT_00802___ 88 CTTAGAGAGAAGCTCGTTCCTCTGGCAGAACAAGGAGCTGA-CTTAAGAA 136
||.|||||.|..||..|.|||...||.||....||||...| |||.|| |
BPUM_0444___r 88 CTAAGAGAAACACTTATGCCTAAAGCCGAGGCGGGAGAGCATCTTGAG-A 136
BSNT_00802___ 137 TTTGCCTGAAAGATGTCAGCTACATGGACAGTACCGGATTGGGCGTTTTT 186
|.||..||||.|||||.|..||.|||||.|||||.|||||.||.||.|||
BPUM_0444___r 137 TCTGTTTGAAGGATGTTACGTATATGGATAGTACAGGATTAGGTGTATTT 186
BSNT_00802___ 187 GTAGGGACCTTTAAA--ATGGTGAAAAAACAAGGTGGTTCGCTGAAACTT 234
||.|||...|||||| | |.|.|||||.| |||.||..|.||.||.|||
BPUM_0444___r 187 GTTGGGCTGTTTAAAGCA-GCTCAAAAAGC-AGGCGGAACACTAAAGCTT 234
BSNT_00802___ 235 GAAAATCTT-TCTGAACGGCTGATCCGACTGTTTGACATTACAGGCTTGA 283
||||| ||| ||.||.|||||..|..|..|||||||.|||||.||.||.|
BPUM_0444___r 235 GAAAA-CTTATCAGATCGGCTTGTAAGGTTGTTTGAAATTACTGGATTAA 283
BSNT_00802___ 284 AGGACATCATTGATATTTCTGCAAAGTCAGAAGGTGGAGTGCAATGA 330
|||||||||||||.|||||||||||||||||.|||||.||.||||||
BPUM_0444___r 284 AGGACATCATTGACATTTCTGCAAAGTCAGAGGGTGGGGTACAATGA 330
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