Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00884 and BPUM_0459
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence dna-align/BSNT_00884___cspC.1.24716.seq
# -bsequence dna-align/BPUM_0459___cspC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00884___cspC-BPUM_0459___cspC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00884___cspC-BPUM_0459___cspC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00884___cspC
# 2: BPUM_0459___cspC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 185/204 (90.7%)
# Similarity: 185/204 (90.7%)
# Gaps: 3/204 ( 1.5%)
# Score: 850.0
#
#
#=======================================
BSNT_00884___ 1 ATGGAACAAGGTACAGTTAAATGGTTTAATGCAGAAAAAGGTTTTGGCTT 50
|||||||||||||||||.|||||||||||.|||||||||||||||||.||
BPUM_0459___c 1 ATGGAACAAGGTACAGTAAAATGGTTTAACGCAGAAAAAGGTTTTGGATT 50
BSNT_00884___ 51 TATCGAACGCGAAAATGGAGACGATGTATTCGTACACTTTTCTGCAATCC 100
|||||||||.|||.|.||.|||||||||||||||||.||.||.||.||||
BPUM_0459___c 51 TATCGAACGTGAAGAAGGCGACGATGTATTCGTACATTTCTCAGCTATCC 100
BSNT_00884___ 101 AAAGTGACGGATTCAAATCTTTAGACGAAGGTCAAAAAGTATCGTTTGAC 150
||.|.||||||||||||||||||||||||||||||||||||||.||||||
BPUM_0459___c 101 AAGGCGACGGATTCAAATCTTTAGACGAAGGTCAAAAAGTATCATTTGAC 150
BSNT_00884___ 151 GTTGAGCAAGGTGCTCGTGGAGCTCAAGCTGCTAACGTTCAAAAA---GC 197
||.|||||||||.|||||||||||||||||||||||||||||||| ||
BPUM_0459___c 151 GTAGAGCAAGGTTCTCGTGGAGCTCAAGCTGCTAACGTTCAAAAAATTGC 200
BSNT_00884___ 198 TTAA 201
||||
BPUM_0459___c 201 TTAA 204
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