Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00885 and BPUM_0460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence dna-align/BSNT_00885___ydeB.1.24716.seq
# -bsequence dna-align/BPUM_0460___ydeB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00885___ydeB-BPUM_0460___ydeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00885___ydeB-BPUM_0460___ydeB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00885___ydeB
# 2: BPUM_0460___ydeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 381/477 (79.9%)
# Similarity: 381/477 (79.9%)
# Gaps: 15/477 ( 3.1%)
# Score: 1581.0
#
#
#=======================================
BSNT_00885___ 1 ATGGAGGTGGATGATATGTTTCAAATTGGCGATAACATTGTTTATCCAAT 50
||||||||||||||.||||||||||||||||||||
BPUM_0460___y 1 ---------------ATGTTTCAAATTGGTGATAACATTGTTTATCCAAT 35
BSNT_00885___ 51 GCACGGAGCAGGTATAATTGAAGCCATAGAAGAAAAAGAATTCTTAGAGG 100
||||||||||||||||||||||||||||||||||||||||||||..||.|
BPUM_0460___y 36 GCACGGAGCAGGTATAATTGAAGCCATAGAAGAAAAAGAATTCTCTGATG 85
BSNT_00885___ 101 AAAAACAACAGTATTATGTCATAAGAATGTCAATCAGTAATATGACAGTT 150
|||||||||||||||||||.||.|.|||||||||||||.||||||.|||.
BPUM_0460___y 86 AAAAACAACAGTATTATGTGATCAAAATGTCAATCAGTCATATGAAAGTG 135
BSNT_00885___ 151 ATGATTCCAACGAGTAAAATATTGAGTTCGAATATACGACCAGTTACCGA 200
||||||||.||..|.|||||||...||||...|||..||||.|||||.||
BPUM_0460___y 136 ATGATTCCGACACGAAAAATATCAGGTTCACGTATTAGACCTGTTACAGA 185
BSNT_00885___ 201 TATACTTGCATTAAAACACATTATGCACATTTTTCAGCATGGAGAATCAG 250
|.||||.||||||||..|..|.||||||.||||.||||||||.|||||||
BPUM_0460___y 186 TCTACTGGCATTAAACAATGTGATGCACGTTTTCCAGCATGGCGAATCAG 235
BSNT_00885___ 251 ATAGGTTACTGCCATGGAAGCAAAGGTACAAAATAAACACGGACAAAATA 300
||...||||||.|||||||..||.||.|.|.|||.||.||..||||||||
BPUM_0460___y 236 ATCAATTACTGACATGGAAAGAACGGCATACAATTAATACAAACAAAATA 285
BSNT_00885___ 301 AAAACAGGTGAAATACAAGAAGGCGCTGAAGTTGTACGTGATTTAATGCG 350
|||||.|||||.||.|||||.||.||.||||||||.||||||.|||||||
BPUM_0460___y 286 AAAACGGGTGATATCCAAGACGGTGCAGAAGTTGTGCGTGATCTAATGCG 335
BSNT_00885___ 351 TATGAAGAAAGAAAAAGCACTTAATGCAAGCGAAAAAAAAATGCTGGATA 400
.|||||||||||.||||||||.|||||.||.|||||.||||||||.|||.
BPUM_0460___y 336 GATGAAGAAAGAGAAAGCACTAAATGCCAGTGAAAAGAAAATGCTAGATG 385
BSNT_00885___ 401 ATGCATATGAATTTTTGATTAGTGAACTGGAAGTAATTAAAGGAATCACT 450
|.||..|||||||||||.|.||||||.|.|||||.||..||||.||.||.
BPUM_0460___y 386 AAGCCCATGAATTTTTGCTAAGTGAATTAGAAGTCATCGAAGGGATTACA 435
BSNT_00885___ 451 GAAAAACAAATAAAAAGTTTTGGTTAG 477
|||||||||||.||||||||..||||.
BPUM_0460___y 436 GAAAAACAAATCAAAAGTTTCTGTTAA 462
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