Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05980 and BPUM_0463

See Amino acid alignment / Visit BSNT_05980 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_05980___bglS.1.24716.seq
#    -bsequence dna-align/BPUM_0463___bglS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05980___bglS-BPUM_0463___bglS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05980___bglS-BPUM_0463___bglS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05980___bglS
# 2: BPUM_0463___bglS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 733
# Identity:     599/733 (81.7%)
# Similarity:   599/733 (81.7%)
# Gaps:           5/733 ( 0.7%)
# Score: 2448.0
# 
#
#=======================================

BSNT_05980___      1 ATGCCTTA---TCTGAAACGAGTGTTGCTGCTTCTTGTCACTGG-ATTGT     46
                     |||.||||   |.||||||||.|||||.||||.||||||||||| ||.||
BPUM_0463___b      1 ATGTCTTACCGTGTGAAACGAATGTTGATGCTACTTGTCACTGGAATCGT     50

BSNT_05980___     47 TTATGAGTTTGTTTGCAGTCACTTCTACTGCCTCGGCTCAAACAGGTGGA     96
                     .| |||||||.|...||.|.|||.|...|||||||||.|||||.||||||
BPUM_0463___b     51 CT-TGAGTTTATCCACATTTACTGCGGGTGCCTCGGCCCAAACGGGTGGA     99

BSNT_05980___     97 TCGTTTTTTGACCCTTTTAACGGCTATAACTCCGGTTTTTGGCAAAAAGC    146
                     |||||||.|||.|||||||||..||||||..|.||.||.|||||||||||
BPUM_0463___b    100 TCGTTTTATGAGCCTTTTAACAACTATAATACGGGGTTATGGCAAAAAGC    149

BSNT_05980___    147 AGATGGTTATTCGAATGGAAATATGTTCAACTGCACGTGGCGGGCTAATA    196
                     .|||||.||.|||||||||||||||||.|||||.||||||||.||.||.|
BPUM_0463___b    150 CGATGGGTACTCGAATGGAAATATGTTTAACTGTACGTGGCGTGCAAACA    199

BSNT_05980___    197 ACGTATCCATGACGTCATTGGGTGAAATGCGTTTAGCGCTAACAAGCCCA    246
                     |.||.||.||||||||.||.|||||||||||.|||.||||.|||||.||.
BPUM_0463___b    200 ATGTCTCAATGACGTCGTTAGGTGAAATGCGATTATCGCTCACAAGTCCT    249

BSNT_05980___    247 TCTTATAACAAGTTTGACTGCGGGGAAAACCGTTCTGTTCAAACATATGG    296
                     ||.|||||.||||||||||||||.||||||||||||..||||||||||||
BPUM_0463___b    250 TCCTATAATAAGTTTGACTGCGGAGAAAACCGTTCTACTCAAACATATGG    299

BSNT_05980___    297 CTATGGACTTTATGAAGTCAGAATGAAACCAGCTAAAAACACAGGGATCG    346
                     |||.||.||||||||||||||.|||||||||||.|||||....|||||||
BPUM_0463___b    300 CTACGGGCTTTATGAAGTCAGCATGAAACCAGCCAAAAATGTGGGGATCG    349

BSNT_05980___    347 TTTCATCGTTCTTCACTTACACAGGTCCAACAGATGGAACTCCTTGGGAT    396
                     |.||.||||||||.|||||.|||||.||.||.|||||.||.|||||||||
BPUM_0463___b    350 TGTCTTCGTTCTTTACTTATACAGGACCGACGGATGGTACGCCTTGGGAT    399

BSNT_05980___    397 GAGATTGATATCGAATTTTTAGGAAAAGACACAACGAAGGTTCAATTTAA    446
                     ||.|||||.|||||||||.||||||||||.||.||.||||||||.|||||
BPUM_0463___b    400 GAAATTGACATCGAATTTCTAGGAAAAGATACGACAAAGGTTCAGTTTAA    449

BSNT_05980___    447 CTATTATACAAATGGTGCAGGAAACCATGAGAAGATTGTTGATCTCGGGT    496
                     |||.|||||.|||||||.||||||.|||||.|||||.||..|.||.||.|
BPUM_0463___b    450 CTACTATACCAATGGTGTAGGAAATCATGAAAAGATCGTCAACCTTGGTT    499

BSNT_05980___    497 TTGATGCAGCCAATGCCTATCATACGTATGCATTCGATTGGCAGCAAAAC    546
                     ||||||||||.||..|.|||||.|||||||||||.||.|||||||..|||
BPUM_0463___b    500 TTGATGCAGCAAACTCTTATCACACGTATGCATTTGACTGGCAGCCTAAC    549

BSNT_05980___    547 TCTATTAAATGGTATGTCGACGGGCAATTAAAACATACTGCAACAAACCA    596
                     ||.||||||||||||||.|||||.|||||||||||||||||.||.|..||
BPUM_0463___b    550 TCGATTAAATGGTATGTAGACGGACAATTAAAACATACTGCCACTACTCA    599

BSNT_05980___    597 AATTCCGACAACACCTGGAAAGATCATGATGAACTTGTGGAATGGCACGG    646
                     |||.||...|||.||.|||||.||.|||||||||.||||||||||..|.|
BPUM_0463___b    600 AATCCCTCAAACGCCAGGAAAAATTATGATGAACCTGTGGAATGGTGCAG    649

BSNT_05980___    647 GTGTCGATGAATGGCTTGGCTCCTACAATGGTGTAAATCCGCTATACGCT    696
                     ||||||||||||||||.||||||||.||.|||||.|..||.||..||||.
BPUM_0463___b    650 GTGTCGATGAATGGCTCGGCTCCTATAACGGTGTTACACCACTCCACGCA    699

BSNT_05980___    697 CATTATGACTGGGTGCGCTATACAAAAAAATAA    729
                     ||||||.|.||||||||.||.|||||||.||||
BPUM_0463___b    700 CATTATAATTGGGTGCGTTACACAAAAAGATAA    732


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