Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00023 and BPUM_0505
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:57
# Commandline: needle
# -asequence dna-align/BSNT_00023___dacA.1.24716.seq
# -bsequence dna-align/BPUM_0505___dacA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00023___dacA-BPUM_0505___dacA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00023___dacA-BPUM_0505___dacA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00023___dacA
# 2: BPUM_0505___dacA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1376
# Identity: 998/1376 (72.5%)
# Similarity: 998/1376 (72.5%)
# Gaps: 94/1376 ( 6.8%)
# Score: 3512.5
#
#
#=======================================
BSNT_00023___ 1 TTGAACATCAAGAAATGTAAACAGCTACTG---------------ATGTC 35
|||||||.|||||.||..||||||||..|| .||.|
BPUM_0505___d 1 TTGAACAGCAAGATATTGAAACAGCTTATGGTCTCTATCCTTGCACTGGC 50
BSNT_00023___ 36 ATTGGTTGTGTTAACTCTAGCTGTCACGTGTCTGGCTCCAATGTCAAAAG 85
||||.||||| || |||..|.| |.||||||||.||||
BPUM_0505___d 51 ATTGATTGTG---AC---AGCATTTA---------CACCAATGTCCAAAG 85
BSNT_00023___ 86 CAAAAGCAGCCAGCGATCCAATTGATATCAATGCATCTGCTGCTATTATG 135
||||||||||....||||||.|..||.|.|||||....||.||.||..|.
BPUM_0505___d 86 CAAAAGCAGCTGAAGATCCATTCAATGTGAATGCGAAAGCAGCGATCCTA 135
BSNT_00023___ 136 ATCGAAGCTTCTTCAGGTAAAATTCTTTACAGTAAAAATGCAGATAAGAG 185
||.|||||||||.|||||||.||||||||.||||||||.|||||..|.||
BPUM_0505___d 136 ATAGAAGCTTCTACAGGTAAGATTCTTTATAGTAAAAACGCAGAACAAAG 185
BSNT_00023___ 186 ACTGCCAATTGCGAGTATGACAAAAATGATGACAGAGTATCTGTTATTAG 235
||||||.|||||.||||||.||||.|||||||||||||||||.|||.|||
BPUM_0505___d 186 ACTGCCTATTGCAAGTATGGCAAAGATGATGACAGAGTATCTATTACTAG 235
BSNT_00023___ 236 AAGCAATTGATCAAGGTAAAGTGAAATGGGACCAAACCTATACGCCTGAT 285
|.||.||||.|.||||.||||||||||||||.|||||.||||||||.|||
BPUM_0505___d 236 AGGCGATTGCTGAAGGCAAAGTGAAATGGGATCAAACGTATACGCCAGAT 285
BSNT_00023___ 286 GACTATGTGTATGAAATTTCCCAAGATAACAGCTTATCAAACGTTCCTCT 335
||.|||||.||.||||||||.||.||...|||.|||||||||||||||.|
BPUM_0505___d 286 GATTATGTATACGAAATTTCTCAGGACCGCAGTTTATCAAACGTTCCTTT 335
BSNT_00023___ 336 TCGGAAAGACGGGAAATACACAGTAAAAGAATTATATCAAGCTACAGCAA 385
..|.|||||.||....||.|||||.||||||.|.||||||||.||.||.|
BPUM_0505___d 336 GAGAAAAGATGGCTCGTATACAGTGAAAGAACTTTATCAAGCAACGGCTA 385
BSNT_00023___ 386 TTTATTCTGCAAATGCTGCTGCTATTGCGATT-GCAGAAATCGTTGCCGG 434
|||||||.||||||||.||.||.|||| |.|| ||||||.|..||||.||
BPUM_0505___d 386 TTTATTCGGCAAATGCAGCAGCAATTG-GCTTAGCAGAAGTGATTGCTGG 434
BSNT_00023___ 435 TTCTGAAACTAAGTTTGTTGAAAAAATGAATGCAAAAGCAAAAGAACTAG 484
.||.|||.|.|||||.||||||||||||||.||.||||||||||||||||
BPUM_0505___d 435 ATCAGAATCGAAGTTCGTTGAAAAAATGAACGCCAAAGCAAAAGAACTAG 484
BSNT_00023___ 485 GCTTAACAGATTACAAATTTGTTAACGCAACAGGTCTTGAAAACAAAGAT 534
|.||||||.|.||||||||.||.||.|||||.|||.|.|||||.|||||
BPUM_0505___d 485 GTTTAACAAACTACAAATTCGTGAATGCAACTGGTTTAGAAAATAAAGA- 533
BSNT_00023___ 535 CTT-CACGGGCATCAGCCTGAGGGGACAAGCGTA--AATGAAGAAAGTGA 581
||| ||.||..|.|||||..|.||.||| .||| .|||||||||||||
BPUM_0505___d 534 CTTACATGGCAAACAGCCAAAAGGTACA--GGTACTGATGAAGAAAGTGA 581
BSNT_00023___ 582 AGTTTCTGCAAAGGATATGGCCATT-CTTGCGGATCACCTGATTACTGAC 630
|||.|||||.||.||||||| |||| |||||..|.||.||.||.|..|||
BPUM_0505___d 582 AGTATCTGCGAAAGATATGG-CATTGCTTGCACAGCATCTCATCAAAGAC 630
BSNT_00023___ 631 TACCCTGAGATACTGGAGACTTCCAGTATCGCCAAAACGAAATTCAGAGA 680
.|.||.||.||.||.||.||.||.|||||.||.|||||.||.||||||||
BPUM_0505___d 631 CATCCAGAAATCCTTGAAACATCAAGTATTGCGAAAACAAAGTTCAGAGA 680
BSNT_00023___ 681 AGGCACCGATGATGAAATGGACATGCCGAACTGGAATTTTATGCTGAAGG 730
||||||.||.|||||||||||||||||.||||||||.||.|||||.||.|
BPUM_0505___d 681 AGGCACAGACGATGAAATGGACATGCCTAACTGGAACTTCATGCTTAAAG 730
BSNT_00023___ 731 GGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGACTGAAAACAGGT 780
|.|||||.|..||.|||.|| ..|||||||||.||.|||||||||
BPUM_0505___d 731 GACTTGTGAAGGAATATGAA------GGTGTAGACGGTCTAAAAACAGGT 774
BSNT_00023___ 781 TCTACTGACTCTGCGGGTTCATGCTTTACAGGAACAGCTGAACGCAACGG 830
|||||.||.||.||.|||||..||||.|||||.||.|||.||| |.||
BPUM_0505___d 775 TCTACAGATTCAGCTGGTTCTAGCTTCACAGGTACGGCTAAAC---AAGG 821
BSNT_00023___ 831 T---ATGCGTGTCATCACTGTTGTATTATACGCAAAGGGCAACCTTCATA 877
| ||||||||.|||.|.||..|.||..|.||.||.||.||.|||||||
BPUM_0505___d 822 TGACATGCGTGTTATCGCAGTGATCTTGAATGCGAAAGGTAATCTTCATA 871
BSNT_00023___ 878 CAGGCCGTTTCGATGAAACGAAGAAAATGTTTGATTATGCTTTCGACAAT 927
|||..||||||||.|...||||.|||.||||.||.|||||.||..|.||.
BPUM_0505___d 872 CAGCACGTTTCGACGTGGCGAAAAAACTGTTCGACTATGCGTTTAAAAAC 921
BSNT_00023___ 928 TTCTCCATGAAAGAAATTTATGCTGAAGGCGATCAAGTAAAAGGCCAT-A 976
|||.|.|||||||||||.||.....||||..|.||..|.|||||.||| |
BPUM_0505___d 922 TTCACGATGAAAGAAATGTACAAAAAAGGTCAACAGATCAAAGGACATGA 971
BSNT_00023___ 977 AAACAGTTTC--AGTTGATAAGGGTAAAGAGAAAGAAGTAGGCATTGTGA 1024
||||| || |||.||.||.||.|||||.|||||||||..|.|.||.|
BPUM_0505___d 972 AAACA---TCGAAGTCGACAAAGGCAAAGACAAAGAAGTACCCGTCGTTA 1018
BSNT_00023___ 1025 C-AAACAAGGCGTTCTCTCTTCCTGTCAAAAATGGTGAGGAAAAGAATTA 1073
| |||.|| ||.||||||.|.||.|||||||||||.||.|||||||..|.
BPUM_0505___d 1019 CGAAAGAA-GCATTCTCTGTGCCAGTCAAAAATGGCGACGAAAAGAGCTT 1067
BSNT_00023___ 1074 CAAAGCGAAGGTCACACTGAATA--AAGATAACTTAACT----GCTCCTG 1117
.|||||.|| |.|.|||| .|||.|||..|||| ||||||.
BPUM_0505___d 1068 TAAAGCAAA------AGTAAATATCGAGAAAACGAAACTCGAAGCTCCTA 1111
BSNT_00023___ 1118 TGAAAAAAGGAACCAAGGTTGGGAAGCTGACTGCGGA----ATACACAGG 1163
|.|||||||||||.||||||||.|.|||||| || .|||.||||
BPUM_0505___d 1112 TTAAAAAAGGAACGAAGGTTGGCATGCTGAC----GACTTCTTACTCAGG 1157
BSNT_00023___ 1164 TGATGAAAAGGATTACGG--ATTCCTTAACAGCGATCTGGCTGGTGTAGA 1211
||||||.|||||.||||| ||| |.||.|..||||...|.|||||.||
BPUM_0505___d 1158 TGATGAGAAGGACTACGGCTATT--TGAATAAAGATCAATCAGGTGTTGA 1205
BSNT_00023___ 1212 CCTTGTTACAAAAGAAAA----TGTAGAAAAAGCAAACTGGTTTGT-TTT 1256
.|||.| ||.||||| .|..|||||||||||||||||..| .||
BPUM_0505___d 1206 GCTTAT----AACGAAAACAGGCGATGAAAAAGCAAACTGGTTCATCCTT 1251
BSNT_00023___ 1257 GACAATGCGCAGTATCGGCGGATTTTTTGCCGGAATTTGGGGAAGCATTG 1306
| |||||||..|.||.||.|||||.||.||.||.||||||||..|.||.|
BPUM_0505___d 1252 G-CAATGCGTGGCATAGGTGGATTCTTCGCTGGCATTTGGGGCGGAATCG 1300
BSNT_00023___ 1307 TTGATACGGTAACCGGCTGGTTTTAA 1332
||||.||.||||..||.|||||.|||
BPUM_0505___d 1301 TTGACACAGTAAAGGGTTGGTTCTAA 1326
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