Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00036 and BPUM_0515
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:58
# Commandline: needle
# -asequence dna-align/BSNT_00036___yaaJ.1.24716.seq
# -bsequence dna-align/BPUM_0515___yaaJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00036___yaaJ-BPUM_0515___yaaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00036___yaaJ-BPUM_0515___yaaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00036___yaaJ
# 2: BPUM_0515___yaaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 352/495 (71.1%)
# Similarity: 352/495 (71.1%)
# Gaps: 27/495 ( 5.5%)
# Score: 1208.5
#
#
#=======================================
BSNT_00036___ 1 ATGACACAAGATGAACTTTATATGAAAGAAGCAATTAAAGAAGCGAAAAA 50
|||||...||||||||..|.||||.|||||||.|||...|||||...|||
BPUM_0515___y 1 ATGACGAGAGATGAACAGTTTATGCAAGAAGCTATTTCTGAAGCCTTAAA 50
BSNT_00036___ 51 GGCTGAAGAGAAAGGTGAAGTGCCAATAGGTGCGGTGCTTGTCGTTAATG 100
.||.|||.|.|.|||.|||||.|||||.|||||..|..|.||.|||.|||
BPUM_0515___y 51 AGCAGAACAAATAGGAGAAGTACCAATCGGTGCCATCATCGTTGTTGATG 100
BSNT_00036___ 101 ATGAAATTAT-AGCGCGTGCACATAATTTAAGAGAGACTGAGCAACGATC 149
|..|||||.| ||| ||.||.|||||||||||.||.||.||||||||.||
BPUM_0515___y 101 ACCAAATTGTGAGC-CGCGCTCATAATTTAAGGGAAACAGAGCAACGTTC 149
BSNT_00036___ 150 TATTGCCCATGCAGAAATGCTTGTAATTGATGAAGCATGTAAGGC-ACTC 198
.|||||.|||||||||.|.||||..|||||||||||.|||||..| |||
BPUM_0515___y 150 AATTGCGCATGCAGAATTACTTGCTATTGATGAAGCGTGTAAAACAACT- 198
BSNT_00036___ 199 GGAACATGGCGGCTGGAAGGTGCGACTCTTTATGTGACGCTTGAGCCATG 248
|.||..|||||..|.||||.|||....|||||||||||||||||.|||||
BPUM_0515___y 199 GAAAGCTGGCGTTTAGAAGATGCTGTACTTTATGTGACGCTTGAACCATG 248
BSNT_00036___ 249 TCCAATGTGTGCTGGTGCCGTCGTACTTTCTCGAGTGGAAAAAGTGGTTT 298
|||.||||||||.||.||..|.||.||||||.|||||.||||.||.||||
BPUM_0515___y 249 TCCTATGTGTGCGGGAGCGATTGTTCTTTCTAGAGTGAAAAAGGTCGTTT 298
BSNT_00036___ 299 TTGGCGCATTTGATCCGAAAGGCGGCTGTTCAGGCACACTAATGAACCTT 348
||||.||||..|||||.|||||.||.|||.||||.||..|||||||..|.
BPUM_0515___y 299 TTGGTGCATACGATCCAAAAGGTGGATGTGCAGGTACTTTAATGAATTTA 348
BSNT_00036___ 349 CTTCAGGAGGAACGCTTTAATCATCAGGCTGAAG----TGGTGAGCGGTG 394
||..|.||.|||||.||.|||||||||.|||||| |||| ||||
BPUM_0515___y 349 CTGGATGATGAACGATTCAATCATCAGTCTGAAGTCATTGGT----GGTG 394
BSNT_00036___ 395 TACTTGAGGAAGAATGCGGCGGAATGCTCAGTGCGTTTTTCAGAGAACTA 444
|||||||..|.||.||.||.|...||||.|||..|||.|||.||.|.||.
BPUM_0515___y 395 TACTTGAAAATGAGTGTGGTGAGTTGCTAAGTCAGTTCTTCCGAAATCTC 444
BSNT_00036___ 445 AG---AAAAAAGAAGAAAGCCGCCAGGAAAAACTTGTCTGAATAG 486
.| |..||||||..|||||...||.||| |||
BPUM_0515___y 445 CGTCAACGAAAGAAACAAGCCAAAAGTAAA--------TGA---- 477
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