Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00040 and BPUM_0517
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:58
# Commandline: needle
# -asequence dna-align/BSNT_00040___yaaK.1.24716.seq
# -bsequence dna-align/BPUM_0517___yaaK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00040___yaaK-BPUM_0517___yaaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00040___yaaK-BPUM_0517___yaaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00040___yaaK
# 2: BPUM_0517___yaaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 263/346 (76.0%)
# Similarity: 263/346 (76.0%)
# Gaps: 44/346 (12.7%)
# Score: 1139.0
#
#
#=======================================
BSNT_00040___ 1 ------------------------------------------ATGCAAAA 8
||||||||
BPUM_0517___y 1 ATGAAAGAGAGTGGTGTTCATATGCGCGGTGGAATGGGAAATATGCAAAA 50
BSNT_00040___ 9 AATGATGAAACAAATGCAAAAAATGCAAAAGGACATGGCGAAGGCTCAAG 58
|||||||||||||||||||||||||||||||||.|||||.||||||||||
BPUM_0517___y 51 AATGATGAAACAAATGCAAAAAATGCAAAAGGATATGGCTAAGGCTCAAG 100
BSNT_00040___ 59 AAGAGCTTGCAGAAAAGGTTGTTGAAGGAACTGCAGGCGGCGGTATGGTA 108
||||||||||||||||.||..|||||||.||.||.||.|||||||||||.
BPUM_0517___y 101 AAGAGCTTGCAGAAAAAGTCCTTGAAGGTACAGCTGGTGGCGGTATGGTC 150
BSNT_00040___ 109 ACAGTAAAAGCAAACGGCCAAAAAGAAATCCTGGATGTTATC-ATCAAAG 157
||.|||||||.|||.||.|||||||||.|..|.|||| ||.| ||.||.|
BPUM_0517___y 151 ACTGTAAAAGTAAATGGACAAAAAGAAGTTGTCGATG-TAGCAATTAATG 199
BSNT_00040___ 158 AAGAAGTCGTTGATCCTGAAGATATTGATATGCTTCAAGATTTAGTGCTT 207
|||||||.||||||||.||||||||.|||||||||||||||.|.||.|||
BPUM_0517___y 200 AAGAAGTTGTTGATCCAGAAGATATCGATATGCTTCAAGATCTTGTACTT 249
BSNT_00040___ 208 GCTGCAACGAATGAAGCTTTGAAAAAAGTTGACGAAATCACAAACGAAAC 257
||.||.||.|||||.||.||||||||||||||.||..|.|||||.|||||
BPUM_0517___y 250 GCAGCGACAAATGATGCATTGAAAAAAGTTGATGAGTTAACAAATGAAAC 299
BSNT_00040___ 258 AATGGGTCAATTTACAAAGGGAATGAACATGCCAGGTTTATTCTAG 303
||||||||||||.|||||.|||||||||||||||||||||||||||
BPUM_0517___y 300 AATGGGTCAATTCACAAAAGGAATGAACATGCCAGGTTTATTCTAG 345
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